Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AL136298.3-201ENST00000556746 445 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 HSD17B1P1-201ENST00000590052 955 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 TEX26-AS1-215ENST00000591300 815 ntTSL 5 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AC073544.2-201ENST00000601155 540 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 MZT1P1-201ENST00000603781 246 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AL163642.2-201ENST00000604722 1019 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AL157904.1-201ENST00000610171 383 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 TUSC7.1-201ENST00000610969 165 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AL158196.1-201ENST00000616786 434 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AC006338.1-201ENST00000618453 749 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AL035461.2-201ENST00000619201 524 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AC009102.1-201ENST00000564074 1777 ntTSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 HLA-DQB1-202ENST00000399079 1501 ntBASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 RBBP4-201ENST00000373485 1417 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-3Q9BYR6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 HIST1H2AA-201ENST00000297012 396 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 RNU6-1009P-201ENST00000390996 107 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC244035.1-201ENST00000430042 390 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 HMGN1P19-201ENST00000436976 333 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC005077.2-201ENST00000449786 690 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC108463.1-201ENST00000450258 347 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 RBMX2P1-201ENST00000454795 836 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 OSTCP1-201ENST00000455507 450 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC021127.1-201ENST00000503589 566 ntTSL 4 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC010395.2-201ENST00000509899 904 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 CASC16-201ENST00000510238 955 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 BTNL8-207ENST00000511704 1260 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AP001533.1-201ENST00000526107 546 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 FAM92A1P1-201ENST00000528023 890 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 UBE2FP2-201ENST00000566646 462 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC104758.5-201ENST00000569892 571 ntTSL 3 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC087683.1-201ENST00000591187 441 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 IMMP1LP1-201ENST00000605170 488 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC128687.1-201ENST00000605304 619 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AL445649.1-201ENST00000615941 691 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 CAMK2D-203ENST00000379773 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 AC027279.4-201ENST00000624371 2072 ntBASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 NPIPB6-202ENST00000533640 1329 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-3Q9BYR6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms