Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 AC067852.2-201ENST00000590513 2313 ntBASIC12.03□□□□□ -0.48
UPK3BQ9BT76 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 LAGE3P1-201ENST00000425356 484 ntBASIC12.03□□□□□ -0.48
UPK3BQ9BT76 AC005104.2-201ENST00000427818 678 ntBASIC12.03□□□□□ -0.48
UPK3BQ9BT76 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 SLC25A6P5-201ENST00000435663 894 ntBASIC12.03□□□□□ -0.48
UPK3BQ9BT76 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 NKAPP1-205ENST00000585790 367 ntBASIC12.03□□□□□ -0.48
UPK3BQ9BT76 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 AC019129.2-201ENST00000609837 1235 ntBASIC12.03□□□□□ -0.48
UPK3BQ9BT76 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 FAM215A-202ENST00000632077 792 ntBASIC12.03□□□□□ -0.48
UPK3BQ9BT76 CICP6-201ENST00000457191 2729 ntBASIC12.03□□□□□ -0.48
UPK3BQ9BT76 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
UPK3BQ9BT76 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 SIRPAP1-201ENST00000448467 1770 ntBASIC12.02□□□□□ -0.48
UPK3BQ9BT76 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
UPK3BQ9BT76 AL354751.1-201ENST00000412768 1863 ntBASIC12.02□□□□□ -0.48
UPK3BQ9BT76 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 KLF4P1-201ENST00000412782 1185 ntBASIC12.02□□□□□ -0.49
UPK3BQ9BT76 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms