Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.3□□□□□ -0.12
GAFA1Q96PS6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 PTCHD3P3-201ENST00000403073 906 ntBASIC14.3□□□□□ -0.12
GAFA1Q96PS6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 AC136632.2-201ENST00000512891 861 ntBASIC14.3□□□□□ -0.12
GAFA1Q96PS6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 AC124947.2-201ENST00000547118 1133 ntBASIC14.3□□□□□ -0.12
GAFA1Q96PS6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 AP001005.1-201ENST00000571755 1248 ntBASIC14.3□□□□□ -0.12
GAFA1Q96PS6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 MIR1199-201ENST00000621445 119 ntBASIC14.3□□□□□ -0.12
GAFA1Q96PS6 AL805961.1-202ENST00000641562 540 ntBASIC14.3□□□□□ -0.12
GAFA1Q96PS6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 FRMD8P1-201ENST00000440433 1524 ntBASIC14.3□□□□□ -0.12
GAFA1Q96PS6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
GAFA1Q96PS6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 AC060834.1-201ENST00000443027 2032 ntBASIC14.29□□□□□ -0.12
GAFA1Q96PS6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 AL356488.2-201ENST00000602755 427 ntBASIC14.29□□□□□ -0.12
GAFA1Q96PS6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 AC243591.1-201ENST00000452967 1364 ntBASIC14.29□□□□□ -0.12
GAFA1Q96PS6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 AC012313.1-201ENST00000593393 3059 ntBASIC14.29□□□□□ -0.12
GAFA1Q96PS6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
GAFA1Q96PS6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms