Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 NTF6B-201ENST00000591913 560 ntBASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 AL031432.5-201ENST00000641059 760 ntBASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 AC125634.1-201ENST00000438758 1403 ntBASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHAMP1Q96JM3 AL135999.2-201ENST00000622438 1686 ntBASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 FRMD8P1-201ENST00000440433 1524 ntBASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 EGFEM1P-202ENST00000431685 1563 ntBASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.97■□□□□ 0.79
CHAMP1Q96JM3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 RN7SL606P-201ENST00000472779 293 ntBASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 AL596257.1-201ENST00000641463 2694 ntBASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.96■□□□□ 0.79
CHAMP1Q96JM3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.95■□□□□ 0.79
CHAMP1Q96JM3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 AC104076.2-201ENST00000448912 469 ntBASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHAMP1Q96JM3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms