Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 FGFR3P6-201ENST00000457012 610 ntBASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 AC064862.7-201ENST00000604520 867 ntBASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 REXO1L6P-202ENST00000619970 1078 ntBASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM5Q96HC4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 TERC-201ENST00000602385 541 ntBASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 AC078925.2-201ENST00000624013 1973 ntBASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.78■□□□□ 0.28
PDLIM5Q96HC4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 PRELID1P1-202ENST00000567272 903 ntBASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms