Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 AL138688.1-201ENST00000624851 1594 ntBASIC17.78■□□□□ 0.44
IFT43Q96FT9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IFT43Q96FT9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 MYCLP1-201ENST00000372451 1075 ntBASIC17.77■□□□□ 0.44
IFT43Q96FT9 AP000347.1-202ENST00000435868 847 ntBASIC17.77■□□□□ 0.44
IFT43Q96FT9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 BX640515.1-201ENST00000617215 977 ntBASIC17.77■□□□□ 0.44
IFT43Q96FT9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
IFT43Q96FT9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IFT43Q96FT9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IFT43Q96FT9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IFT43Q96FT9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.77■□□□□ 0.43
IFT43Q96FT9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 RCN1P2-201ENST00000398357 915 ntBASIC17.76■□□□□ 0.43
IFT43Q96FT9 RBM17P3-201ENST00000417687 1192 ntBASIC17.76■□□□□ 0.43
IFT43Q96FT9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 AL773604.1-201ENST00000617417 272 ntBASIC17.76■□□□□ 0.43
IFT43Q96FT9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
IFT43Q96FT9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT43Q96FT9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms