Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 AL078644.1-201ENST00000609881 752 ntBASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 AC004877.2-201ENST00000623941 599 ntBASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 AC010507.1-201ENST00000633895 436 ntBASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A1Q93050 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 AC096734.2-201ENST00000562054 433 ntBASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 AL355385.1-201ENST00000606123 409 ntBASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 AC026471.1-201ENST00000564629 3026 ntBASIC19.22■□□□□ 0.67
ATP6V0A1Q93050 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 HMGN1P19-201ENST00000436976 333 ntBASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 MKNK2P1-201ENST00000437526 628 ntBASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 OR7E47P-204ENST00000575924 449 ntBASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 KRT18P28-201ENST00000453838 1332 ntBASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 BCAR1-209ENST00000546196 1340 ntBASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A1Q93050 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 AC254562.1-201ENST00000417586 456 ntBASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 PDPK2P-202ENST00000562415 1191 ntBASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A1Q93050 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms