Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 AC009078.2-202ENST00000463353 338 ntBASIC17.69■□□□□ 0.42
SCG3Q8WXD2 AC091607.1-201ENST00000490318 1060 ntBASIC17.69■□□□□ 0.42
SCG3Q8WXD2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 MIR5100-201ENST00000579544 119 ntBASIC17.69■□□□□ 0.42
SCG3Q8WXD2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 AP002469.2-201ENST00000531724 424 ntBASIC17.68■□□□□ 0.42
SCG3Q8WXD2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.68■□□□□ 0.42
SCG3Q8WXD2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 AC114341.1-201ENST00000618070 349 ntBASIC17.68■□□□□ 0.42
SCG3Q8WXD2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCG3Q8WXD2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 AC009533.2-201ENST00000543664 586 ntBASIC17.67■□□□□ 0.42
SCG3Q8WXD2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 BNIP3P18-201ENST00000593976 575 ntBASIC17.67■□□□□ 0.42
SCG3Q8WXD2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG3Q8WXD2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG3Q8WXD2 REXO1L11P-201ENST00000620964 1927 ntBASIC17.66■□□□□ 0.42
SCG3Q8WXD2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms