Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 AC106028.4-201ENST00000614509 607 ntBASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 AC022211.2-201ENST00000585075 2527 ntBASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 AC060834.1-201ENST00000443027 2032 ntBASIC20.31■□□□□ 0.84
NKX2-3Q8TAU0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 RPS15P9-201ENST00000494093 319 ntBASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 DUX4L17-201ENST00000557360 1267 ntBASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 C20orf181-201ENST00000623918 480 ntBASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-3Q8TAU0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 AC016396.2-201ENST00000562575 1417 ntBASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 AC136632.2-201ENST00000512891 861 ntBASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 GPR89P-201ENST00000407924 1495 ntBASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.29■□□□□ 0.84
NKX2-3Q8TAU0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 MKNK2P1-201ENST00000437526 628 ntBASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 AC006557.2-201ENST00000592985 1240 ntBASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-3Q8TAU0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 EGFEM1P-202ENST00000431685 1563 ntBASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 AC108751.1-201ENST00000490852 363 ntBASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 IGHV3-65-201ENST00000523210 341 ntBASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms