Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 AC073621.1-201ENST00000392730 636 ntBASIC18.39■□□□□ 0.53
LMO3Q8TAP4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.39■□□□□ 0.53
LMO3Q8TAP4 PTCHD3P3-201ENST00000403073 906 ntBASIC18.39■□□□□ 0.53
LMO3Q8TAP4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 AC018712.1-201ENST00000455767 687 ntBASIC18.39■□□□□ 0.53
LMO3Q8TAP4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 AL121912.1-201ENST00000603683 238 ntBASIC18.39■□□□□ 0.53
LMO3Q8TAP4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 LAGE3P1-201ENST00000425356 484 ntBASIC18.38■□□□□ 0.53
LMO3Q8TAP4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 AC079781.3-201ENST00000449110 356 ntBASIC18.38■□□□□ 0.53
LMO3Q8TAP4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 RNPS1P1-201ENST00000507437 918 ntBASIC18.38■□□□□ 0.53
LMO3Q8TAP4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LMO3Q8TAP4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 ELK2BP-201ENST00000415014 1224 ntBASIC18.37■□□□□ 0.53
LMO3Q8TAP4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 RPS2P1-201ENST00000434010 821 ntBASIC18.37■□□□□ 0.53
LMO3Q8TAP4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 RN7SL510P-201ENST00000581311 263 ntBASIC18.37■□□□□ 0.53
LMO3Q8TAP4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 AC104692.2-201ENST00000603054 253 ntBASIC18.37■□□□□ 0.53
LMO3Q8TAP4 TUBB8P12-201ENST00000308911 1335 ntBASIC18.37■□□□□ 0.53
LMO3Q8TAP4 TUBB7P-202ENST00000428444 1305 ntBASIC18.37■□□□□ 0.53
LMO3Q8TAP4 TUBB8P7-204ENST00000567960 1332 ntBASIC18.37■□□□□ 0.53
LMO3Q8TAP4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.37■□□□□ 0.53
LMO3Q8TAP4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms