Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MIR940-201ENST00000401276 94 ntBASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 RNA5SP415-201ENST00000517246 115 ntBASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 IGHV3-22-201ENST00000520721 359 ntBASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 AC106730.1-201ENST00000566722 1090 ntBASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 AL139327.4-201ENST00000612362 153 ntBASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 AC004706.3-202ENST00000621574 984 ntBASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 AC117500.6-201ENST00000624871 588 ntBASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 ELK2BP-201ENST00000415014 1224 ntBASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 KRT18P58-201ENST00000527480 1120 ntBASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 AL139424.1-201ENST00000607572 797 ntBASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 Z83851.2-201ENST00000609564 659 ntBASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM48Q8IWZ4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 KRT18P27-201ENST00000427733 1299 ntBASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM48Q8IWZ4 LINC00304-203ENST00000565008 1864 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms