Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 AC093214.1-201ENST00000511688 1107 ntBASIC18.25■□□□□ 0.51
RNF135Q8IUD6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 AC100803.2-201ENST00000562459 1963 ntBASIC18.24■□□□□ 0.51
RNF135Q8IUD6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 AC025580.3-201ENST00000617932 1424 ntBASIC18.24■□□□□ 0.51
RNF135Q8IUD6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 AC092902.6-201ENST00000641783 218 ntBASIC18.24■□□□□ 0.51
RNF135Q8IUD6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF135Q8IUD6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 AL020989.1-201ENST00000422979 469 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms