Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.59□□□□□ -0.07
RAI1Q7Z5J4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAI1Q7Z5J4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 AL355306.1-201ENST00000415580 579 ntBASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 TIMM8BP1-201ENST00000452384 211 ntBASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 COX20P2-201ENST00000452636 358 ntBASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI1Q7Z5J4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 AC004835.2-201ENST00000603762 682 ntBASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 LINC00628-201ENST00000628516 1289 ntBASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAI1Q7Z5J4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 CROCCP2-202ENST00000412962 2773 ntBASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 GPS2P2-201ENST00000430745 888 ntBASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 AC069335.1-201ENST00000489972 472 ntBASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 AC004449.1-201ENST00000564240 433 ntBASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 REXO1L3P-201ENST00000622202 1288 ntBASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RAI1Q7Z5J4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 AC067863.1-201ENST00000494933 530 ntBASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 LETM1P2-201ENST00000597330 2178 ntBASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms