Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 AC135586.1-201ENST00000539323 574 ntBASIC14.74□□□□□ -0.05
LRRK2Q5S007 AC243960.2-201ENST00000600996 747 ntBASIC14.74□□□□□ -0.05
LRRK2Q5S007 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.74□□□□□ -0.05
LRRK2Q5S007 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 CTBP2P3-201ENST00000585629 1255 ntBASIC14.74□□□□□ -0.05
LRRK2Q5S007 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRK2Q5S007 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRK2Q5S007 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 USP32P1-208ENST00000506594 1164 ntBASIC14.73□□□□□ -0.05
LRRK2Q5S007 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 MIR8072-201ENST00000614241 80 ntBASIC14.73□□□□□ -0.05
LRRK2Q5S007 MIR6775-201ENST00000617557 69 ntBASIC14.73□□□□□ -0.05
LRRK2Q5S007 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRK2Q5S007 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRK2Q5S007 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 RNA5SP412-201ENST00000516234 123 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms