Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.08■□□□□ 0
FREM1Q5H8C1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.08■□□□□ 0
FREM1Q5H8C1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.07■□□□□ 0
FREM1Q5H8C1 PI4KAP1-204ENST00000612579 1703 ntBASIC15.07■□□□□ 0
FREM1Q5H8C1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.07■□□□□ 0
FREM1Q5H8C1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.07■□□□□ 0
FREM1Q5H8C1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
FREM1Q5H8C1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.07■□□□□ 0
FREM1Q5H8C1 PRSS29P-201ENST00000440800 595 ntBASIC15.07■□□□□ 0
FREM1Q5H8C1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.07■□□□□ 0
FREM1Q5H8C1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
FREM1Q5H8C1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
FREM1Q5H8C1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.07■□□□□ 0
FREM1Q5H8C1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.07■□□□□ 0
FREM1Q5H8C1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
FREM1Q5H8C1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.07■□□□□ 0
FREM1Q5H8C1 AC092068.3-201ENST00000587894 2016 ntBASIC15.07■□□□□ 0
FREM1Q5H8C1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
FREM1Q5H8C1 MCCD1P2-201ENST00000423228 335 ntBASIC15.07■□□□□ 0
FREM1Q5H8C1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.07■□□□□ 0
FREM1Q5H8C1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.07■□□□□ 0
FREM1Q5H8C1 AC002347.1-201ENST00000569543 541 ntBASIC15.07■□□□□ 0
FREM1Q5H8C1 AC010507.1-201ENST00000633895 436 ntBASIC15.07■□□□□ 0
FREM1Q5H8C1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
FREM1Q5H8C1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM1Q5H8C1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.06■□□□□ 0
FREM1Q5H8C1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.06■□□□□ 0
FREM1Q5H8C1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.06■□□□□ 0
FREM1Q5H8C1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
FREM1Q5H8C1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
FREM1Q5H8C1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.06■□□□□ 0
FREM1Q5H8C1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
FREM1Q5H8C1 ALG1L5P-201ENST00000482043 771 ntBASIC15.06■□□□□ 0
FREM1Q5H8C1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.06■□□□□ 0
FREM1Q5H8C1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
FREM1Q5H8C1 REXO1L3P-201ENST00000622202 1288 ntBASIC15.06■□□□□ 0
FREM1Q5H8C1 AC055717.3-201ENST00000622967 595 ntBASIC15.06■□□□□ 0
FREM1Q5H8C1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
FREM1Q5H8C1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
FREM1Q5H8C1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
FREM1Q5H8C1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
FREM1Q5H8C1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM1Q5H8C1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
FREM1Q5H8C1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FREM1Q5H8C1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.05■□□□□ 0
FREM1Q5H8C1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.05■□□□□ 0
FREM1Q5H8C1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
FREM1Q5H8C1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.05■□□□□ 0
FREM1Q5H8C1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
FREM1Q5H8C1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.05■□□□□ 0
FREM1Q5H8C1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.05■□□□□ 0
FREM1Q5H8C1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.05■□□□□ 0
FREM1Q5H8C1 RNA5SP416-201ENST00000516838 111 ntBASIC15.05■□□□□ 0
FREM1Q5H8C1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
FREM1Q5H8C1 MIR4751-201ENST00000578027 74 ntBASIC15.05■□□□□ 0
FREM1Q5H8C1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.05■□□□□ 0
FREM1Q5H8C1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.05■□□□□ 0
FREM1Q5H8C1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FREM1Q5H8C1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.05■□□□□ 0
FREM1Q5H8C1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FREM1Q5H8C1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FREM1Q5H8C1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.05■□□□□ 0
FREM1Q5H8C1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
FREM1Q5H8C1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FREM1Q5H8C1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms