Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 FAM220CP-201ENST00000395253 831 ntBASIC19.59■□□□□ 0.73
LONRF3Q496Y0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 AC103564.2-201ENST00000432853 1299 ntBASIC19.59■□□□□ 0.73
LONRF3Q496Y0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 STK25P1-201ENST00000585406 838 ntBASIC19.59■□□□□ 0.73
LONRF3Q496Y0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 AC114341.1-201ENST00000618070 349 ntBASIC19.59■□□□□ 0.73
LONRF3Q496Y0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
LONRF3Q496Y0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.58■□□□□ 0.73
LONRF3Q496Y0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LONRF3Q496Y0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 HLA-A-201ENST00000376802 1334 ntBASIC19.57■□□□□ 0.72
LONRF3Q496Y0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 AL353593.2-201ENST00000602529 1483 ntBASIC19.57■□□□□ 0.72
LONRF3Q496Y0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 AL022342.1-201ENST00000400363 863 ntBASIC19.57■□□□□ 0.72
LONRF3Q496Y0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 FAM197Y8-203ENST00000450145 560 ntBASIC19.57■□□□□ 0.72
LONRF3Q496Y0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 AC148477.8-201ENST00000624298 468 ntBASIC19.57■□□□□ 0.72
LONRF3Q496Y0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LONRF3Q496Y0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.56■□□□□ 0.72
LONRF3Q496Y0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms