Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 AL353801.3-201ENST00000609898 542 ntBASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 AL691432.3-201ENST00000621860 400 ntBASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCGF3Q3KNV8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 AGGF1P2-201ENST00000426656 2106 ntBASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 MINOS1P3-201ENST00000457048 203 ntBASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 LINC00167-201ENST00000530583 1419 ntBASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 LINC01711-201ENST00000598340 967 ntBASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 AL121772.3-201ENST00000610840 674 ntBASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCGF3Q3KNV8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 AC022898.2-201ENST00000616822 1312 ntBASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 AL450487.1-201ENST00000426799 995 ntBASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 AC068472.1-201ENST00000474589 881 ntBASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.29■□□□□ 0.04
PCGF3Q3KNV8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms