Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.38■□□□□ 0.53
CTC1Q2NKJ3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 AC124067.4-201ENST00000519691 2379 ntBASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 AC005034.1-201ENST00000426657 489 ntBASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 ADH5P3-201ENST00000433842 1137 ntBASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 CXCL1P1-201ENST00000502804 216 ntBASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTC1Q2NKJ3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 AC093010.1-201ENST00000473625 1624 ntBASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 AC067863.1-201ENST00000494933 530 ntBASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 AC009093.7-201ENST00000623853 1223 ntBASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.36■□□□□ 0.53
CTC1Q2NKJ3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 AIRN-201ENST00000601203 4374 ntBASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 PMS2P4-201ENST00000412466 1052 ntBASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms