Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP1P78357 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 AC022144.1-201ENST00000602255 1580 ntBASIC20.29■□□□□ 0.84
CNTNAP1P78357 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 MIR658-201ENST00000385210 100 ntBASIC20.29■□□□□ 0.84
CNTNAP1P78357 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 LINC01225-203ENST00000563550 1244 ntBASIC20.29■□□□□ 0.84
CNTNAP1P78357 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 AC084121.4-201ENST00000641598 221 ntBASIC20.29■□□□□ 0.84
CNTNAP1P78357 AF228730.8-201ENST00000642140 221 ntBASIC20.29■□□□□ 0.84
CNTNAP1P78357 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP1P78357 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CNTNAP1P78357 AC100757.3-201ENST00000622361 1406 ntBASIC20.29■□□□□ 0.84
CNTNAP1P78357 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP1P78357 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP1P78357 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP1P78357 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.28■□□□□ 0.84
CNTNAP1P78357 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 IGHV3-62-201ENST00000520057 340 ntBASIC20.28■□□□□ 0.84
CNTNAP1P78357 KRT8P23-201ENST00000560090 1207 ntBASIC20.28■□□□□ 0.84
CNTNAP1P78357 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP1P78357 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP1P78357 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP1P78357 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP1P78357 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP1P78357 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.28■□□□□ 0.84
CNTNAP1P78357 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 UXT-AS1-201ENST00000590504 1525 ntBASIC20.27■□□□□ 0.84
CNTNAP1P78357 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP1P78357 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP1P78357 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP1P78357 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP1P78357 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 AC098614.1-201ENST00000368528 745 ntBASIC20.27■□□□□ 0.84
CNTNAP1P78357 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP1P78357 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP1P78357 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 MIR4515-201ENST00000584082 81 ntBASIC20.27■□□□□ 0.84
CNTNAP1P78357 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP1P78357 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CNTNAP1P78357 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP1P78357 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNTNAP1P78357 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNTNAP1P78357 GNAS-203ENST00000306120 1878 ntBASIC20.27■□□□□ 0.83
CNTNAP1P78357 AC120498.9-201ENST00000339021 3867 ntBASIC20.26■□□□□ 0.83
CNTNAP1P78357 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP1P78357 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP1P78357 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CNTNAP1P78357 BICD1-207ENST00000551848 1962 ntBASIC20.26■□□□□ 0.83
CNTNAP1P78357 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP1P78357 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP1P78357 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms