Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.14■□□□□ 0.01
SEC61A1P61619 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.14■□□□□ 0.01
SEC61A1P61619 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
SEC61A1P61619 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SEC61A1P61619 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.14■□□□□ 0.01
SEC61A1P61619 LINC00265-3P-201ENST00000447588 903 ntBASIC15.14■□□□□ 0.01
SEC61A1P61619 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.14■□□□□ 0.01
SEC61A1P61619 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.14■□□□□ 0.01
SEC61A1P61619 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.14■□□□□ 0.01
SEC61A1P61619 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 IGHV3-41-201ENST00000613121 348 ntBASIC15.14■□□□□ 0.01
SEC61A1P61619 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.14■□□□□ 0.01
SEC61A1P61619 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.14■□□□□ 0.01
SEC61A1P61619 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SEC61A1P61619 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.14■□□□□ 0.01
SEC61A1P61619 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.14■□□□□ 0.01
SEC61A1P61619 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SEC61A1P61619 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SEC61A1P61619 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.14■□□□□ 0.01
SEC61A1P61619 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SEC61A1P61619 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.13■□□□□ 0.01
SEC61A1P61619 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.13■□□□□ 0.01
SEC61A1P61619 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 LINC00554-201ENST00000564841 3011 ntBASIC15.13■□□□□ 0.01
SEC61A1P61619 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SEC61A1P61619 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 TOB2P1-201ENST00000469761 992 ntBASIC15.13■□□□□ 0.01
SEC61A1P61619 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.13■□□□□ 0.01
SEC61A1P61619 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SEC61A1P61619 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 KRT89P-201ENST00000620027 1478 ntBASIC15.13■□□□□ 0.01
SEC61A1P61619 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SEC61A1P61619 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
SEC61A1P61619 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SEC61A1P61619 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.13■□□□□ 0.01
SEC61A1P61619 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SEC61A1P61619 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SEC61A1P61619 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.12■□□□□ 0.01
SEC61A1P61619 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
SEC61A1P61619 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SEC61A1P61619 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SEC61A1P61619 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.12■□□□□ 0.01
SEC61A1P61619 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.12■□□□□ 0.01
SEC61A1P61619 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.12■□□□□ 0.01
SEC61A1P61619 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.12■□□□□ 0.01
SEC61A1P61619 AP000867.3-201ENST00000524675 377 ntBASIC15.12■□□□□ 0.01
SEC61A1P61619 KRT126P-201ENST00000549467 1181 ntBASIC15.12■□□□□ 0.01
SEC61A1P61619 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.12■□□□□ 0.01
SEC61A1P61619 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SEC61A1P61619 MIR3652-201ENST00000579335 131 ntBASIC15.12■□□□□ 0.01
SEC61A1P61619 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.12■□□□□ 0.01
SEC61A1P61619 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 AL121894.2-201ENST00000602977 491 ntBASIC15.12■□□□□ 0.01
SEC61A1P61619 AL592071.1-201ENST00000611956 408 ntBASIC15.12■□□□□ 0.01
SEC61A1P61619 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.12■□□□□ 0.01
SEC61A1P61619 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.12■□□□□ 0.01
SEC61A1P61619 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.12■□□□□ 0.01
SEC61A1P61619 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms