Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC139713.2-201ENST00000641328 2723 ntBASIC17.55■□□□□ 0.4
CDH4P55283 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH4P55283 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH4P55283 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH4P55283 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH4P55283 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.55■□□□□ 0.4
CDH4P55283 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.55■□□□□ 0.4
CDH4P55283 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH4P55283 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 OR7E47P-204ENST00000575924 449 ntBASIC17.55■□□□□ 0.4
CDH4P55283 AC064836.3-201ENST00000607928 673 ntBASIC17.55■□□□□ 0.4
CDH4P55283 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH4P55283 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH4P55283 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH4P55283 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDH4P55283 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH4P55283 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH4P55283 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH4P55283 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
CDH4P55283 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CDH4P55283 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH4P55283 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH4P55283 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CDH4P55283 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.54■□□□□ 0.4
CDH4P55283 AC007967.2-201ENST00000432613 625 ntBASIC17.54■□□□□ 0.4
CDH4P55283 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.54■□□□□ 0.4
CDH4P55283 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH4P55283 HCG4B-203ENST00000450128 991 ntBASIC17.54■□□□□ 0.4
CDH4P55283 KRT18P3-201ENST00000451602 1288 ntBASIC17.54■□□□□ 0.4
CDH4P55283 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH4P55283 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH4P55283 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH4P55283 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH4P55283 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH4P55283 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH4P55283 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH4P55283 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDH4P55283 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CDH4P55283 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH4P55283 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH4P55283 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDH4P55283 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDH4P55283 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH4P55283 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CDH4P55283 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDH4P55283 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CDH4P55283 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH4P55283 SLC25A6P2-201ENST00000497974 877 ntBASIC17.53■□□□□ 0.4
CDH4P55283 RNA5SP416-201ENST00000516838 111 ntBASIC17.53■□□□□ 0.4
CDH4P55283 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.53■□□□□ 0.4
CDH4P55283 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH4P55283 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH4P55283 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH4P55283 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH4P55283 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH4P55283 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CDH4P55283 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH4P55283 FRMD8P1-201ENST00000440433 1524 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms