Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.06■□□□□ 0.16
PSMD4P55036 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.06■□□□□ 0.16
PSMD4P55036 AL732292.2-201ENST00000609649 430 ntBASIC16.06■□□□□ 0.16
PSMD4P55036 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.06■□□□□ 0.16
PSMD4P55036 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMD4P55036 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PSMD4P55036 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PSMD4P55036 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.06■□□□□ 0.16
PSMD4P55036 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMD4P55036 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PSMD4P55036 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMD4P55036 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMD4P55036 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.05■□□□□ 0.16
PSMD4P55036 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.05■□□□□ 0.16
PSMD4P55036 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PSMD4P55036 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.05■□□□□ 0.16
PSMD4P55036 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PSMD4P55036 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.05■□□□□ 0.16
PSMD4P55036 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 SCARNA2-201ENST00000458748 420 ntBASIC16.05■□□□□ 0.16
PSMD4P55036 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.05■□□□□ 0.16
PSMD4P55036 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.05■□□□□ 0.16
PSMD4P55036 AL139288.1-201ENST00000623748 933 ntBASIC16.05■□□□□ 0.16
PSMD4P55036 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PSMD4P55036 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PSMD4P55036 AC079776.2-201ENST00000641154 1609 ntBASIC16.05■□□□□ 0.16
PSMD4P55036 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.04■□□□□ 0.16
PSMD4P55036 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.04■□□□□ 0.16
PSMD4P55036 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PSMD4P55036 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.04■□□□□ 0.16
PSMD4P55036 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
PSMD4P55036 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.04■□□□□ 0.16
PSMD4P55036 SAPCD2P3-201ENST00000455031 850 ntBASIC16.04■□□□□ 0.16
PSMD4P55036 AP001269.4-201ENST00000609611 512 ntBASIC16.04■□□□□ 0.16
PSMD4P55036 REXO1L6P-202ENST00000619970 1078 ntBASIC16.04■□□□□ 0.16
PSMD4P55036 AC073592.4-201ENST00000623827 446 ntBASIC16.04■□□□□ 0.16
PSMD4P55036 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.04■□□□□ 0.16
PSMD4P55036 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.04■□□□□ 0.16
PSMD4P55036 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.04■□□□□ 0.16
PSMD4P55036 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
PSMD4P55036 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.04■□□□□ 0.16
PSMD4P55036 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PSMD4P55036 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PSMD4P55036 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.03■□□□□ 0.16
PSMD4P55036 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PSMD4P55036 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PSMD4P55036 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.03■□□□□ 0.16
PSMD4P55036 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PSMD4P55036 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PSMD4P55036 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PSMD4P55036 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PSMD4P55036 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PSMD4P55036 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PSMD4P55036 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PSMD4P55036 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PSMD4P55036 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.03■□□□□ 0.16
PSMD4P55036 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PSMD4P55036 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.03■□□□□ 0.16
PSMD4P55036 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.03■□□□□ 0.16
PSMD4P55036 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.03■□□□□ 0.16
PSMD4P55036 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.03■□□□□ 0.16
PSMD4P55036 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.03■□□□□ 0.16
PSMD4P55036 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.03■□□□□ 0.16
PSMD4P55036 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms