Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLCN3P51790 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 AC068137.2-201ENST00000605408 478 ntBASIC18.84■□□□□ 0.61
CLCN3P51790 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN3P51790 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.84■□□□□ 0.61
CLCN3P51790 AL138688.1-201ENST00000624851 1594 ntBASIC18.84■□□□□ 0.61
CLCN3P51790 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN3P51790 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLCN3P51790 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN3P51790 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CLCN3P51790 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN3P51790 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
CLCN3P51790 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN3P51790 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CLCN3P51790 AC093525.9-201ENST00000624961 1746 ntBASIC18.83■□□□□ 0.61
CLCN3P51790 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN3P51790 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.83■□□□□ 0.61
CLCN3P51790 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
CLCN3P51790 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.83■□□□□ 0.61
CLCN3P51790 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
CLCN3P51790 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN3P51790 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN3P51790 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN3P51790 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN3P51790 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN3P51790 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN3P51790 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLCN3P51790 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.83■□□□□ 0.6
CLCN3P51790 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN3P51790 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCN3P51790 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.83■□□□□ 0.6
CLCN3P51790 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCN3P51790 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CLCN3P51790 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCN3P51790 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.83■□□□□ 0.6
CLCN3P51790 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN3P51790 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLCN3P51790 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
CLCN3P51790 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN3P51790 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
CLCN3P51790 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCN3P51790 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN3P51790 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN3P51790 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN3P51790 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLCN3P51790 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLCN3P51790 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLCN3P51790 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLCN3P51790 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCN3P51790 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLCN3P51790 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCN3P51790 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCN3P51790 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCN3P51790 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCN3P51790 REXO1L3P-201ENST00000622202 1288 ntBASIC18.82■□□□□ 0.6
CLCN3P51790 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLCN3P51790 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLCN3P51790 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.82■□□□□ 0.6
CLCN3P51790 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 AC016396.2-201ENST00000562575 1417 ntBASIC18.82■□□□□ 0.6
CLCN3P51790 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN3P51790 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCN3P51790 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLCN3P51790 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CLCN3P51790 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCN3P51790 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLCN3P51790 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.81■□□□□ 0.6
CLCN3P51790 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCN3P51790 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.81■□□□□ 0.6
CLCN3P51790 AP002472.1-201ENST00000577490 586 ntBASIC18.81■□□□□ 0.6
CLCN3P51790 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.81■□□□□ 0.6
CLCN3P51790 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.81■□□□□ 0.6
CLCN3P51790 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 AC092902.6-201ENST00000641783 218 ntBASIC18.81■□□□□ 0.6
CLCN3P51790 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms