Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC008494.3-201ENST00000606615 944 ntBASIC19.19■□□□□ 0.66
CENPFP49454 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.19■□□□□ 0.66
CENPFP49454 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CENPFP49454 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.19■□□□□ 0.66
CENPFP49454 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CENPFP49454 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CENPFP49454 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 AL353779.1-201ENST00000434793 351 ntBASIC19.19■□□□□ 0.66
CENPFP49454 AC109635.5-201ENST00000533593 962 ntBASIC19.19■□□□□ 0.66
CENPFP49454 TEX28P1-201ENST00000613479 1221 ntBASIC19.19■□□□□ 0.66
CENPFP49454 TEX28P2-201ENST00000617764 1221 ntBASIC19.19■□□□□ 0.66
CENPFP49454 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPFP49454 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPFP49454 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.18■□□□□ 0.66
CENPFP49454 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.18■□□□□ 0.66
CENPFP49454 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.18■□□□□ 0.66
CENPFP49454 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPFP49454 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPFP49454 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.18■□□□□ 0.66
CENPFP49454 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CENPFP49454 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CENPFP49454 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.18■□□□□ 0.66
CENPFP49454 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.18■□□□□ 0.66
CENPFP49454 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.18■□□□□ 0.66
CENPFP49454 COX11-210ENST00000639671 696 ntBASIC19.18■□□□□ 0.66
CENPFP49454 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPFP49454 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPFP49454 INE1-201ENST00000456273 945 ntBASIC19.17■□□□□ 0.66
CENPFP49454 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.17■□□□□ 0.66
CENPFP49454 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CENPFP49454 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.17■□□□□ 0.66
CENPFP49454 AL161645.1-201ENST00000622716 1255 ntBASIC19.17■□□□□ 0.66
CENPFP49454 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPFP49454 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPFP49454 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.17■□□□□ 0.66
CENPFP49454 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CENPFP49454 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPFP49454 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPFP49454 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.17■□□□□ 0.66
CENPFP49454 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.17■□□□□ 0.66
CENPFP49454 AC098818.2-201ENST00000564925 2320 ntBASIC19.17■□□□□ 0.66
CENPFP49454 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CENPFP49454 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CENPFP49454 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
CENPFP49454 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.17■□□□□ 0.66
CENPFP49454 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPFP49454 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CENPFP49454 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.17■□□□□ 0.66
CENPFP49454 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPFP49454 RAB43P1-201ENST00000561790 589 ntBASIC19.17■□□□□ 0.66
CENPFP49454 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CENPFP49454 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPFP49454 FOXO1B-201ENST00000504678 1527 ntBASIC19.16■□□□□ 0.66
CENPFP49454 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.16■□□□□ 0.66
CENPFP49454 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CENPFP49454 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CENPFP49454 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 RN7SL837P-201ENST00000463010 287 ntBASIC19.16■□□□□ 0.66
CENPFP49454 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.16■□□□□ 0.66
CENPFP49454 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CENPFP49454 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.16■□□□□ 0.66
CENPFP49454 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.16■□□□□ 0.66
CENPFP49454 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.16■□□□□ 0.66
CENPFP49454 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.16■□□□□ 0.66
CENPFP49454 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.16■□□□□ 0.66
CENPFP49454 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.16■□□□□ 0.66
CENPFP49454 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.16■□□□□ 0.66
CENPFP49454 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.16■□□□□ 0.66
CENPFP49454 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.16■□□□□ 0.66
CENPFP49454 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.16■□□□□ 0.66
CENPFP49454 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.16■□□□□ 0.66
CENPFP49454 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.16■□□□□ 0.66
CENPFP49454 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.16■□□□□ 0.66
CENPFP49454 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.16■□□□□ 0.66
CENPFP49454 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.16■□□□□ 0.66
CENPFP49454 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 AC106820.2-201ENST00000563775 3264 ntBASIC19.16■□□□□ 0.66
CENPFP49454 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.16■□□□□ 0.66
CENPFP49454 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CENPFP49454 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPFP49454 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.15■□□□□ 0.66
CENPFP49454 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms