Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.82■□□□□ 0.6
USP8P40818 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.82■□□□□ 0.6
USP8P40818 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.81■□□□□ 0.6
USP8P40818 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP8P40818 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
USP8P40818 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.81■□□□□ 0.6
USP8P40818 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 DRAXINP1-201ENST00000437611 948 ntBASIC18.81■□□□□ 0.6
USP8P40818 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP8P40818 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.81■□□□□ 0.6
USP8P40818 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.81■□□□□ 0.6
USP8P40818 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.81■□□□□ 0.6
USP8P40818 AC009533.2-201ENST00000543664 586 ntBASIC18.81■□□□□ 0.6
USP8P40818 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP8P40818 AC092119.3-201ENST00000612618 583 ntBASIC18.81■□□□□ 0.6
USP8P40818 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.81■□□□□ 0.6
USP8P40818 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.81■□□□□ 0.6
USP8P40818 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 CICP6-201ENST00000457191 2729 ntBASIC18.81■□□□□ 0.6
USP8P40818 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.81■□□□□ 0.6
USP8P40818 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.81■□□□□ 0.6
USP8P40818 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.81■□□□□ 0.6
USP8P40818 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.81■□□□□ 0.6
USP8P40818 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP8P40818 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
USP8P40818 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USP8P40818 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.8■□□□□ 0.6
USP8P40818 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.8■□□□□ 0.6
USP8P40818 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.8■□□□□ 0.6
USP8P40818 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
USP8P40818 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
USP8P40818 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.8■□□□□ 0.6
USP8P40818 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
USP8P40818 KRT17P6-201ENST00000453795 1220 ntBASIC18.8■□□□□ 0.6
USP8P40818 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.8■□□□□ 0.6
USP8P40818 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.8■□□□□ 0.6
USP8P40818 AC074051.2-201ENST00000565115 352 ntBASIC18.8■□□□□ 0.6
USP8P40818 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.8■□□□□ 0.6
USP8P40818 AC019129.2-201ENST00000609837 1235 ntBASIC18.8■□□□□ 0.6
USP8P40818 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
USP8P40818 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP8P40818 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
USP8P40818 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
USP8P40818 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.8■□□□□ 0.6
USP8P40818 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP8P40818 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.79■□□□□ 0.6
USP8P40818 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
USP8P40818 AP001094.4-201ENST00000579008 2176 ntBASIC18.79■□□□□ 0.6
USP8P40818 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP8P40818 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP8P40818 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP8P40818 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
USP8P40818 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP8P40818 AC122714.2-201ENST00000502787 707 ntBASIC18.79■□□□□ 0.6
USP8P40818 AC096582.2-201ENST00000510860 516 ntBASIC18.79■□□□□ 0.6
USP8P40818 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.79■□□□□ 0.6
USP8P40818 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.79■□□□□ 0.6
USP8P40818 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.79■□□□□ 0.6
USP8P40818 AC111152.3-201ENST00000569699 673 ntBASIC18.79■□□□□ 0.6
USP8P40818 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.79■□□□□ 0.6
USP8P40818 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.79■□□□□ 0.6
USP8P40818 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.79■□□□□ 0.6
USP8P40818 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP8P40818 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
USP8P40818 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms