Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 EGFEM1P-202ENST00000431685 1563 ntBASIC19.54■□□□□ 0.72
HOXA13P31271 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 AC025580.3-201ENST00000617932 1424 ntBASIC19.54■□□□□ 0.72
HOXA13P31271 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXA13P31271 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
HOXA13P31271 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.54■□□□□ 0.72
HOXA13P31271 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXA13P31271 KRT19P2-202ENST00000557173 1012 ntBASIC19.54■□□□□ 0.72
HOXA13P31271 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HOXA13P31271 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXA13P31271 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 ACTL9-202ENST00000612068 1252 ntBASIC19.54■□□□□ 0.72
HOXA13P31271 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 AC005332.8-201ENST00000622750 2735 ntBASIC19.54■□□□□ 0.72
HOXA13P31271 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXA13P31271 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA13P31271 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.54■□□□□ 0.72
HOXA13P31271 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXA13P31271 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HOXA13P31271 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 AC116353.5-201ENST00000638148 1699 ntBASIC19.53■□□□□ 0.72
HOXA13P31271 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXA13P31271 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 MCCD1P2-201ENST00000423228 335 ntBASIC19.53■□□□□ 0.72
HOXA13P31271 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 FAM185BP-201ENST00000443595 716 ntBASIC19.53■□□□□ 0.72
HOXA13P31271 DNAJB3-201ENST00000446806 729 ntBASIC19.53■□□□□ 0.72
HOXA13P31271 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HOXA13P31271 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXA13P31271 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
HOXA13P31271 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXA13P31271 MTDHP5-201ENST00000598980 586 ntBASIC19.53■□□□□ 0.72
HOXA13P31271 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 AC106820.2-201ENST00000563775 3264 ntBASIC19.53■□□□□ 0.72
HOXA13P31271 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXA13P31271 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA13P31271 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA13P31271 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HOXA13P31271 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA13P31271 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXA13P31271 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA13P31271 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA13P31271 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA13P31271 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA13P31271 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA13P31271 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA13P31271 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA13P31271 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA13P31271 ALG1L5P-201ENST00000482043 771 ntBASIC19.52■□□□□ 0.72
HOXA13P31271 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXA13P31271 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXA13P31271 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.52■□□□□ 0.72
HOXA13P31271 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXA13P31271 MIR3687-2-201ENST00000577708 61 ntBASIC19.52■□□□□ 0.72
HOXA13P31271 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXA13P31271 MIR3687-1-201ENST00000614492 61 ntBASIC19.52■□□□□ 0.72
HOXA13P31271 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HOXA13P31271 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HOXA13P31271 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA13P31271 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
HOXA13P31271 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.52■□□□□ 0.71
HOXA13P31271 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HOXA13P31271 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HOXA13P31271 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HOXA13P31271 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HOXA13P31271 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms