Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
HLA-FP30511 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-FP30511 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-FP30511 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-FP30511 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-FP30511 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HLA-FP30511 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-FP30511 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HLA-FP30511 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HLA-FP30511 AC092919.2-201ENST00000623631 1645 ntBASIC17.4■□□□□ 0.38
HLA-FP30511 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HLA-FP30511 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-FP30511 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
HLA-FP30511 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-FP30511 FAM58CP-201ENST00000435741 640 ntBASIC17.4■□□□□ 0.38
HLA-FP30511 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
HLA-FP30511 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-FP30511 AL031432.2-201ENST00000566714 459 ntBASIC17.4■□□□□ 0.38
HLA-FP30511 AL928711.1-201ENST00000570165 459 ntBASIC17.4■□□□□ 0.38
HLA-FP30511 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-FP30511 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-FP30511 AC068137.2-201ENST00000605408 478 ntBASIC17.4■□□□□ 0.38
HLA-FP30511 AC091812.2-201ENST00000619081 385 ntBASIC17.4■□□□□ 0.38
HLA-FP30511 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 CROCCP2-202ENST00000412962 2773 ntBASIC17.4■□□□□ 0.38
HLA-FP30511 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
HLA-FP30511 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-FP30511 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-FP30511 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-FP30511 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-FP30511 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-FP30511 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-FP30511 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HLA-FP30511 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
HLA-FP30511 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-FP30511 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-FP30511 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HLA-FP30511 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-FP30511 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-FP30511 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-FP30511 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-FP30511 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HLA-FP30511 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.39■□□□□ 0.37
HLA-FP30511 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-FP30511 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-FP30511 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-FP30511 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-FP30511 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-FP30511 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HLA-FP30511 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-FP30511 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-FP30511 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-FP30511 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-FP30511 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
HLA-FP30511 BCL2-203ENST00000589955 5011 ntBASIC17.38■□□□□ 0.37
HLA-FP30511 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-FP30511 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HLA-FP30511 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.38■□□□□ 0.37
HLA-FP30511 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.38■□□□□ 0.37
HLA-FP30511 CEND1P1-201ENST00000451006 455 ntBASIC17.38■□□□□ 0.37
HLA-FP30511 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms