Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN6P29350 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN6P29350 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN6P29350 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTPN6P29350 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PTPN6P29350 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 AC103564.2-201ENST00000432853 1299 ntBASIC16.35■□□□□ 0.21
PTPN6P29350 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PTPN6P29350 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.35■□□□□ 0.21
PTPN6P29350 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN6P29350 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.35■□□□□ 0.21
PTPN6P29350 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PTPN6P29350 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN6P29350 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
PTPN6P29350 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN6P29350 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN6P29350 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN6P29350 NSUN5P1-202ENST00000421140 1535 ntBASIC16.35■□□□□ 0.21
PTPN6P29350 NSUN5P2-203ENST00000457352 1529 ntBASIC16.35■□□□□ 0.21
PTPN6P29350 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 AL603756.1-201ENST00000606511 2163 ntBASIC16.34■□□□□ 0.21
PTPN6P29350 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
PTPN6P29350 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN6P29350 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN6P29350 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PTPN6P29350 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.34■□□□□ 0.21
PTPN6P29350 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.34■□□□□ 0.21
PTPN6P29350 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.34■□□□□ 0.21
PTPN6P29350 KRT126P-201ENST00000549467 1181 ntBASIC16.34■□□□□ 0.21
PTPN6P29350 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN6P29350 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 OR6D1P-202ENST00000641007 5290 ntBASIC16.34■□□□□ 0.21
PTPN6P29350 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN6P29350 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
PTPN6P29350 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PTPN6P29350 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
PTPN6P29350 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN6P29350 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PTPN6P29350 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
PTPN6P29350 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN6P29350 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.33■□□□□ 0.21
PTPN6P29350 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN6P29350 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.33■□□□□ 0.21
PTPN6P29350 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.33■□□□□ 0.21
PTPN6P29350 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PTPN6P29350 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PTPN6P29350 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PTPN6P29350 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN6P29350 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN6P29350 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN6P29350 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.33■□□□□ 0.2
PTPN6P29350 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PTPN6P29350 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms