Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC233724.13-201ENST00000598383 410 ntBASIC22.23■■□□□ 1.15
RXRBP28702 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.23■■□□□ 1.15
RXRBP28702 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC22.23■■□□□ 1.15
RXRBP28702 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.23■■□□□ 1.15
RXRBP28702 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.23■■□□□ 1.15
RXRBP28702 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
RXRBP28702 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC22.23■■□□□ 1.15
RXRBP28702 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.23■■□□□ 1.15
RXRBP28702 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 SLC25A24-204ENST00000569674 2357 ntBASIC22.23■■□□□ 1.15
RXRBP28702 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC22.23■■□□□ 1.15
RXRBP28702 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.22■■□□□ 1.15
RXRBP28702 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RXRBP28702 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RXRBP28702 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RXRBP28702 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC22.22■■□□□ 1.15
RXRBP28702 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
RXRBP28702 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RXRBP28702 AC253536.4-201ENST00000440539 267 ntBASIC22.22■■□□□ 1.15
RXRBP28702 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC22.22■■□□□ 1.15
RXRBP28702 MBP-227ENST00000526111 581 ntTSL 4 BASIC22.22■■□□□ 1.15
RXRBP28702 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC22.22■■□□□ 1.15
RXRBP28702 BANF1P1-201ENST00000553684 263 ntBASIC22.22■■□□□ 1.15
RXRBP28702 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC22.22■■□□□ 1.15
RXRBP28702 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
RXRBP28702 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC22.22■■□□□ 1.15
RXRBP28702 U62317.3-201ENST00000608319 855 ntBASIC22.22■■□□□ 1.15
RXRBP28702 AC015967.2-201ENST00000624092 234 ntBASIC22.22■■□□□ 1.15
RXRBP28702 AC006435.4-201ENST00000625037 234 ntBASIC22.22■■□□□ 1.15
RXRBP28702 AL356737.1-201ENST00000634391 234 ntBASIC22.22■■□□□ 1.15
RXRBP28702 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RXRBP28702 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RXRBP28702 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RXRBP28702 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RXRBP28702 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC22.21■■□□□ 1.15
RXRBP28702 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RXRBP28702 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC22.21■■□□□ 1.15
RXRBP28702 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RXRBP28702 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RXRBP28702 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RXRBP28702 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RXRBP28702 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.21■■□□□ 1.15
RXRBP28702 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RXRBP28702 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RXRBP28702 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
RXRBP28702 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
RXRBP28702 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC22.21■■□□□ 1.15
RXRBP28702 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC22.21■■□□□ 1.15
RXRBP28702 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC22.21■■□□□ 1.15
RXRBP28702 FADS2-212ENST00000522639 360 ntTSL 5 BASIC22.21■■□□□ 1.15
RXRBP28702 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RXRBP28702 C2orf69P2-201ENST00000562032 1123 ntBASIC22.21■■□□□ 1.15
RXRBP28702 FADS2-215ENST00000574708 385 ntTSL 3 BASIC22.21■■□□□ 1.15
RXRBP28702 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC22.21■■□□□ 1.15
RXRBP28702 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC22.21■■□□□ 1.15
RXRBP28702 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC22.21■■□□□ 1.15
RXRBP28702 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.21■■□□□ 1.15
RXRBP28702 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.21■■□□□ 1.15
RXRBP28702 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC22.21■■□□□ 1.15
RXRBP28702 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RXRBP28702 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RXRBP28702 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
RXRBP28702 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
RXRBP28702 HNRNPRP1-201ENST00000453465 1695 ntBASIC22.2■■□□□ 1.15
RXRBP28702 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RXRBP28702 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC22.2■■□□□ 1.14
RXRBP28702 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RXRBP28702 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.2■■□□□ 1.14
RXRBP28702 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RXRBP28702 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RXRBP28702 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC22.2■■□□□ 1.14
RXRBP28702 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC22.2■■□□□ 1.14
RXRBP28702 FO681548.1-201ENST00000455617 1132 ntBASIC22.2■■□□□ 1.14
RXRBP28702 LDHBP1-201ENST00000455730 1119 ntBASIC22.2■■□□□ 1.14
RXRBP28702 KRT18P34-201ENST00000488218 1270 ntBASIC22.2■■□□□ 1.14
RXRBP28702 FADS2-205ENST00000517839 469 ntTSL 3 BASIC22.2■■□□□ 1.14
RXRBP28702 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC22.2■■□□□ 1.14
RXRBP28702 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.2■■□□□ 1.14
RXRBP28702 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC22.2■■□□□ 1.14
RXRBP28702 MIR4722-201ENST00000578292 60 ntBASIC22.2■■□□□ 1.14
RXRBP28702 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC22.2■■□□□ 1.14
RXRBP28702 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RXRBP28702 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RXRBP28702 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC22.2■■□□□ 1.14
RXRBP28702 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RXRBP28702 FOXO1B-201ENST00000504678 1527 ntBASIC22.2■■□□□ 1.14
RXRBP28702 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RXRBP28702 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.2■■□□□ 1.14
RXRBP28702 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RXRBP28702 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC22.2■■□□□ 1.14
RXRBP28702 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
RXRBP28702 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RXRBP28702 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RXRBP28702 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC22.19■■□□□ 1.14
RXRBP28702 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC22.19■■□□□ 1.14
RXRBP28702 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC22.19■■□□□ 1.14
RXRBP28702 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms