Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RFX1P22670 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RFX1P22670 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.76■□□□□ 0.59
RFX1P22670 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.76■□□□□ 0.59
RFX1P22670 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
RFX1P22670 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 MED15P5-201ENST00000423150 992 ntBASIC18.76■□□□□ 0.59
RFX1P22670 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RFX1P22670 AC027601.4-201ENST00000611259 610 ntBASIC18.76■□□□□ 0.59
RFX1P22670 AD001527.2-201ENST00000622994 785 ntBASIC18.76■□□□□ 0.59
RFX1P22670 FAM215A-202ENST00000632077 792 ntBASIC18.76■□□□□ 0.59
RFX1P22670 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.76■□□□□ 0.59
RFX1P22670 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 AC009336.1-201ENST00000608941 1553 ntBASIC18.76■□□□□ 0.59
RFX1P22670 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RFX1P22670 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RFX1P22670 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RFX1P22670 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
RFX1P22670 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.75■□□□□ 0.59
RFX1P22670 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
RFX1P22670 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RFX1P22670 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.75■□□□□ 0.59
RFX1P22670 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RFX1P22670 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.75■□□□□ 0.59
RFX1P22670 AC018712.1-201ENST00000455767 687 ntBASIC18.75■□□□□ 0.59
RFX1P22670 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RFX1P22670 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.75■□□□□ 0.59
RFX1P22670 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.75■□□□□ 0.59
RFX1P22670 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.75■□□□□ 0.59
RFX1P22670 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.75■□□□□ 0.59
RFX1P22670 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 MTDHP3-201ENST00000594186 672 ntBASIC18.75■□□□□ 0.59
RFX1P22670 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.75■□□□□ 0.59
RFX1P22670 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 TP73-AS1-210ENST00000637775 1455 ntBASIC18.75■□□□□ 0.59
RFX1P22670 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.75■□□□□ 0.59
RFX1P22670 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RFX1P22670 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX1P22670 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX1P22670 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
RFX1P22670 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RFX1P22670 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.74■□□□□ 0.59
RFX1P22670 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX1P22670 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.74■□□□□ 0.59
RFX1P22670 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RFX1P22670 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.74■□□□□ 0.59
RFX1P22670 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.74■□□□□ 0.59
RFX1P22670 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX1P22670 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.74■□□□□ 0.59
RFX1P22670 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX1P22670 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.74■□□□□ 0.59
RFX1P22670 AC010327.4-202ENST00000591484 748 ntBASIC18.74■□□□□ 0.59
RFX1P22670 AL355385.1-201ENST00000606123 409 ntBASIC18.74■□□□□ 0.59
RFX1P22670 CROCCP1-201ENST00000426910 5675 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms