Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC2P18074 FAM197Y8-203ENST00000450145 560 ntBASIC17.71■□□□□ 0.43
ERCC2P18074 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.71■□□□□ 0.43
ERCC2P18074 RNPS1P1-201ENST00000507437 918 ntBASIC17.71■□□□□ 0.43
ERCC2P18074 AC073648.2-201ENST00000510116 352 ntBASIC17.71■□□□□ 0.43
ERCC2P18074 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC2P18074 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC2P18074 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC2P18074 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC2P18074 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC2P18074 AL139424.1-201ENST00000607572 797 ntBASIC17.71■□□□□ 0.43
ERCC2P18074 AL031008.1-201ENST00000619963 541 ntBASIC17.71■□□□□ 0.43
ERCC2P18074 AC004706.3-202ENST00000621574 984 ntBASIC17.71■□□□□ 0.43
ERCC2P18074 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.71■□□□□ 0.43
ERCC2P18074 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.71■□□□□ 0.43
ERCC2P18074 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.71■□□□□ 0.42
ERCC2P18074 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.71■□□□□ 0.42
ERCC2P18074 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
ERCC2P18074 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC2P18074 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC2P18074 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC2P18074 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC2P18074 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC2P18074 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ERCC2P18074 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ERCC2P18074 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC2P18074 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC2P18074 RPS2P1-201ENST00000434010 821 ntBASIC17.7■□□□□ 0.42
ERCC2P18074 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC2P18074 FAAHP1-202ENST00000446499 1238 ntBASIC17.7■□□□□ 0.42
ERCC2P18074 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.7■□□□□ 0.42
ERCC2P18074 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.7■□□□□ 0.42
ERCC2P18074 AC124947.2-201ENST00000547118 1133 ntBASIC17.7■□□□□ 0.42
ERCC2P18074 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.7■□□□□ 0.42
ERCC2P18074 AC107918.4-202ENST00000641623 219 ntBASIC17.7■□□□□ 0.42
ERCC2P18074 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 FRMD8P1-201ENST00000440433 1524 ntBASIC17.7■□□□□ 0.42
ERCC2P18074 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ERCC2P18074 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC2P18074 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC2P18074 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC2P18074 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ERCC2P18074 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC2P18074 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
ERCC2P18074 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
ERCC2P18074 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ERCC2P18074 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC2P18074 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
ERCC2P18074 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC2P18074 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ERCC2P18074 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC2P18074 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC2P18074 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.69■□□□□ 0.42
ERCC2P18074 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC2P18074 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.69■□□□□ 0.42
ERCC2P18074 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.69■□□□□ 0.42
ERCC2P18074 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC2P18074 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ERCC2P18074 AC104692.2-201ENST00000603054 253 ntBASIC17.69■□□□□ 0.42
ERCC2P18074 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ERCC2P18074 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ERCC2P18074 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ERCC2P18074 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC2P18074 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms