Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL3L1P16619 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCL3L1P16619 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCL3L1P16619 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL3L1P16619 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCL3L1P16619 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCL3L1P16619 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCL3L1P16619 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCL3L1P16619 HNRNPDP1-201ENST00000439535 754 ntBASIC14.22□□□□□ -0.13
CCL3L1P16619 AC018712.1-201ENST00000455767 687 ntBASIC14.22□□□□□ -0.13
CCL3L1P16619 AC009078.2-202ENST00000463353 338 ntBASIC14.22□□□□□ -0.13
CCL3L1P16619 OR7E14P-202ENST00000530490 1290 ntBASIC14.22□□□□□ -0.13
CCL3L1P16619 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CCL3L1P16619 AC139887.3-201ENST00000568585 713 ntBASIC14.22□□□□□ -0.13
CCL3L1P16619 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCL3L1P16619 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL3L1P16619 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL3L1P16619 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCL3L1P16619 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.22□□□□□ -0.13
CCL3L1P16619 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.22□□□□□ -0.13
CCL3L1P16619 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL3L1P16619 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.22□□□□□ -0.13
CCL3L1P16619 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCL3L1P16619 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL3L1P16619 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL3L1P16619 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCL3L1P16619 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CCL3L1P16619 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CCL3L1P16619 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCL3L1P16619 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CCL3L1P16619 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL3L1P16619 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL3L1P16619 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL3L1P16619 MRPL3P1-201ENST00000400109 1033 ntBASIC14.21□□□□□ -0.13
CCL3L1P16619 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL3L1P16619 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.21□□□□□ -0.13
CCL3L1P16619 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL3L1P16619 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.21□□□□□ -0.13
CCL3L1P16619 AL589182.2-201ENST00000619332 1049 ntBASIC14.21□□□□□ -0.13
CCL3L1P16619 AC107918.4-202ENST00000641623 219 ntBASIC14.21□□□□□ -0.13
CCL3L1P16619 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCL3L1P16619 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
CCL3L1P16619 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL3L1P16619 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CCL3L1P16619 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
CCL3L1P16619 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCL3L1P16619 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CCL3L1P16619 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL3L1P16619 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCL3L1P16619 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL3L1P16619 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCL3L1P16619 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCL3L1P16619 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL3L1P16619 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL3L1P16619 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL3L1P16619 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCL3L1P16619 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.2□□□□□ -0.14
CCL3L1P16619 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL3L1P16619 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL3L1P16619 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL3L1P16619 LAGE3P1-201ENST00000425356 484 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms