Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.91■□□□□ 0.62
ITGA4P13612 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA4P13612 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.9■□□□□ 0.62
ITGA4P13612 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ITGA4P13612 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.9■□□□□ 0.62
ITGA4P13612 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.9■□□□□ 0.62
ITGA4P13612 RPS15P9-201ENST00000494093 319 ntBASIC18.9■□□□□ 0.62
ITGA4P13612 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.9■□□□□ 0.62
ITGA4P13612 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.9■□□□□ 0.62
ITGA4P13612 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.9■□□□□ 0.62
ITGA4P13612 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ITGA4P13612 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ITGA4P13612 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
ITGA4P13612 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA4P13612 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.89■□□□□ 0.62
ITGA4P13612 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.89■□□□□ 0.62
ITGA4P13612 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ITGA4P13612 AC084018.2-201ENST00000613093 2607 ntBASIC18.89■□□□□ 0.62
ITGA4P13612 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ITGA4P13612 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ITGA4P13612 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ITGA4P13612 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ITGA4P13612 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA4P13612 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA4P13612 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.89■□□□□ 0.61
ITGA4P13612 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA4P13612 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA4P13612 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.89■□□□□ 0.61
ITGA4P13612 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA4P13612 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ITGA4P13612 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ITGA4P13612 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ITGA4P13612 MIR1233-2-201ENST00000408138 82 ntBASIC18.89■□□□□ 0.61
ITGA4P13612 MIR1233-1-201ENST00000408722 82 ntBASIC18.89■□□□□ 0.61
ITGA4P13612 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.89■□□□□ 0.61
ITGA4P13612 LINC00982-205ENST00000420957 435 ntBASIC18.89■□□□□ 0.61
ITGA4P13612 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.89■□□□□ 0.61
ITGA4P13612 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.89■□□□□ 0.61
ITGA4P13612 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.89■□□□□ 0.61
ITGA4P13612 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.89■□□□□ 0.61
ITGA4P13612 AC040169.1-201ENST00000565382 521 ntBASIC18.89■□□□□ 0.61
ITGA4P13612 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.89■□□□□ 0.61
ITGA4P13612 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.89■□□□□ 0.61
ITGA4P13612 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.89■□□□□ 0.61
ITGA4P13612 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.89■□□□□ 0.61
ITGA4P13612 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA4P13612 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.89■□□□□ 0.61
ITGA4P13612 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.89■□□□□ 0.61
ITGA4P13612 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA4P13612 AP001094.4-201ENST00000579008 2176 ntBASIC18.89■□□□□ 0.61
ITGA4P13612 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA4P13612 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA4P13612 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.89■□□□□ 0.61
ITGA4P13612 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA4P13612 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ITGA4P13612 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ITGA4P13612 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA4P13612 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA4P13612 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.88■□□□□ 0.61
ITGA4P13612 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA4P13612 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA4P13612 AD000864.1-201ENST00000624076 2295 ntBASIC18.88■□□□□ 0.61
ITGA4P13612 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA4P13612 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
ITGA4P13612 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
ITGA4P13612 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA4P13612 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.88■□□□□ 0.61
ITGA4P13612 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA4P13612 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.88■□□□□ 0.61
ITGA4P13612 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.88■□□□□ 0.61
ITGA4P13612 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.88■□□□□ 0.61
ITGA4P13612 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.88■□□□□ 0.61
ITGA4P13612 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.88■□□□□ 0.61
ITGA4P13612 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.88■□□□□ 0.61
ITGA4P13612 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.88■□□□□ 0.61
ITGA4P13612 AC064836.3-201ENST00000607928 673 ntBASIC18.88■□□□□ 0.61
ITGA4P13612 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA4P13612 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms