Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM2P07951 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
TPM2P07951 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPM2P07951 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM2P07951 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM2P07951 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.66■□□□□ 0.74
TPM2P07951 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM2P07951 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM2P07951 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.65■□□□□ 0.74
TPM2P07951 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TPM2P07951 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TPM2P07951 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TPM2P07951 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM2P07951 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM2P07951 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM2P07951 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TPM2P07951 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TPM2P07951 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM2P07951 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.65■□□□□ 0.74
TPM2P07951 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TPM2P07951 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM2P07951 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 LINC00167-201ENST00000530583 1419 ntBASIC19.65■□□□□ 0.74
TPM2P07951 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TPM2P07951 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TPM2P07951 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.65■□□□□ 0.74
TPM2P07951 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM2P07951 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.64■□□□□ 0.74
TPM2P07951 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.64■□□□□ 0.74
TPM2P07951 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPM2P07951 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.64■□□□□ 0.73
TPM2P07951 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 AC113404.2-201ENST00000507884 177 ntBASIC19.64■□□□□ 0.73
TPM2P07951 FAM87A-204ENST00000613235 858 ntBASIC19.64■□□□□ 0.73
TPM2P07951 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.64■□□□□ 0.73
TPM2P07951 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
TPM2P07951 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
TPM2P07951 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TPM2P07951 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.64■□□□□ 0.73
TPM2P07951 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM2P07951 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TPM2P07951 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 C8orf49-201ENST00000525043 1968 ntBASIC19.63■□□□□ 0.73
TPM2P07951 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TPM2P07951 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TPM2P07951 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TPM2P07951 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TPM2P07951 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.63■□□□□ 0.73
TPM2P07951 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM2P07951 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM2P07951 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.63■□□□□ 0.73
TPM2P07951 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.63■□□□□ 0.73
TPM2P07951 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM2P07951 AL157888.1-201ENST00000631930 593 ntBASIC19.63■□□□□ 0.73
TPM2P07951 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
TPM2P07951 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TPM2P07951 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM2P07951 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TPM2P07951 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.63■□□□□ 0.73
TPM2P07951 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TPM2P07951 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM2P07951 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPM2P07951 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM2P07951 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.62■□□□□ 0.73
TPM2P07951 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
TPM2P07951 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms