Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.99■□□□□ 0.31
CAPN1P07384 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CAPN1P07384 AC002558.1-201ENST00000488906 803 ntBASIC16.99■□□□□ 0.31
CAPN1P07384 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.99■□□□□ 0.31
CAPN1P07384 AC096582.2-201ENST00000510860 516 ntBASIC16.99■□□□□ 0.31
CAPN1P07384 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN1P07384 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.99■□□□□ 0.31
CAPN1P07384 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CAPN1P07384 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CAPN1P07384 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
CAPN1P07384 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.99■□□□□ 0.31
CAPN1P07384 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN1P07384 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CAPN1P07384 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN1P07384 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN1P07384 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CAPN1P07384 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN1P07384 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CAPN1P07384 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CAPN1P07384 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN1P07384 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN1P07384 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CAPN1P07384 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.98■□□□□ 0.31
CAPN1P07384 RCN1P2-201ENST00000398357 915 ntBASIC16.98■□□□□ 0.31
CAPN1P07384 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
CAPN1P07384 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.98■□□□□ 0.31
CAPN1P07384 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.98■□□□□ 0.31
CAPN1P07384 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.98■□□□□ 0.31
CAPN1P07384 AL138831.2-201ENST00000606564 490 ntBASIC16.98■□□□□ 0.31
CAPN1P07384 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.98■□□□□ 0.31
CAPN1P07384 TP73-AS1-207ENST00000624167 988 ntBASIC16.98■□□□□ 0.31
CAPN1P07384 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN1P07384 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN1P07384 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPN1P07384 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CAPN1P07384 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN1P07384 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
CAPN1P07384 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN1P07384 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPN1P07384 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN1P07384 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPN1P07384 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CAPN1P07384 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CAPN1P07384 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CAPN1P07384 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 AC084018.2-201ENST00000613093 2607 ntBASIC16.97■□□□□ 0.31
CAPN1P07384 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CAPN1P07384 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.97■□□□□ 0.31
CAPN1P07384 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
CAPN1P07384 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CAPN1P07384 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.97■□□□□ 0.31
CAPN1P07384 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.97■□□□□ 0.31
CAPN1P07384 AL662844.1-201ENST00000546340 181 ntBASIC16.97■□□□□ 0.31
CAPN1P07384 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.97■□□□□ 0.31
CAPN1P07384 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPN1P07384 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms