Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PDGFAP04085 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PDGFAP04085 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.13■□□□□ 0.17
PDGFAP04085 PHGDH-209ENST00000641074 1780 ntBASIC16.13■□□□□ 0.17
PDGFAP04085 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.13■□□□□ 0.17
PDGFAP04085 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PDGFAP04085 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PDGFAP04085 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PDGFAP04085 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 ELL2P1-201ENST00000413990 1906 ntBASIC16.12■□□□□ 0.17
PDGFAP04085 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PDGFAP04085 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.12■□□□□ 0.17
PDGFAP04085 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
PDGFAP04085 CEND1P1-201ENST00000451006 455 ntBASIC16.12■□□□□ 0.17
PDGFAP04085 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.12■□□□□ 0.17
PDGFAP04085 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.12■□□□□ 0.17
PDGFAP04085 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
PDGFAP04085 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.12■□□□□ 0.17
PDGFAP04085 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PDGFAP04085 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.12■□□□□ 0.17
PDGFAP04085 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.12■□□□□ 0.17
PDGFAP04085 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PDGFAP04085 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.12■□□□□ 0.17
PDGFAP04085 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.12■□□□□ 0.17
PDGFAP04085 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PDGFAP04085 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.12■□□□□ 0.17
PDGFAP04085 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PDGFAP04085 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 AC093010.1-201ENST00000473625 1624 ntBASIC16.12■□□□□ 0.17
PDGFAP04085 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.12■□□□□ 0.17
PDGFAP04085 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDGFAP04085 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.11■□□□□ 0.17
PDGFAP04085 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.11■□□□□ 0.17
PDGFAP04085 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.11■□□□□ 0.17
PDGFAP04085 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
PDGFAP04085 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PDGFAP04085 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
PDGFAP04085 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.11■□□□□ 0.17
PDGFAP04085 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.11■□□□□ 0.17
PDGFAP04085 AL645939.2-201ENST00000427340 991 ntBASIC16.11■□□□□ 0.17
PDGFAP04085 PRSS29P-201ENST00000440800 595 ntBASIC16.11■□□□□ 0.17
PDGFAP04085 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.11■□□□□ 0.17
PDGFAP04085 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.11■□□□□ 0.17
PDGFAP04085 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
PDGFAP04085 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.11■□□□□ 0.17
PDGFAP04085 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.11■□□□□ 0.17
PDGFAP04085 AL031432.2-201ENST00000566714 459 ntBASIC16.11■□□□□ 0.17
PDGFAP04085 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PDGFAP04085 AL928711.1-201ENST00000570165 459 ntBASIC16.11■□□□□ 0.17
PDGFAP04085 AP002472.1-201ENST00000577490 586 ntBASIC16.11■□□□□ 0.17
PDGFAP04085 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.11■□□□□ 0.17
PDGFAP04085 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.11■□□□□ 0.17
PDGFAP04085 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
PDGFAP04085 AC027612.4-201ENST00000605371 583 ntBASIC16.11■□□□□ 0.17
PDGFAP04085 AC106028.4-201ENST00000614509 607 ntBASIC16.11■□□□□ 0.17
PDGFAP04085 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.11■□□□□ 0.17
PDGFAP04085 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.11■□□□□ 0.17
PDGFAP04085 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFAP04085 NCF1C-201ENST00000438382 1427 ntBASIC16.11■□□□□ 0.17
PDGFAP04085 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms