Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GGPS1O95749 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
GGPS1O95749 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.28■□□□□ 0.68
GGPS1O95749 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
GGPS1O95749 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
GGPS1O95749 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GGPS1O95749 SNHG9-202ENST00000564014 471 ntBASIC19.28■□□□□ 0.68
GGPS1O95749 AL031432.2-201ENST00000566714 459 ntBASIC19.28■□□□□ 0.68
GGPS1O95749 AL928711.1-201ENST00000570165 459 ntBASIC19.28■□□□□ 0.68
GGPS1O95749 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.28■□□□□ 0.68
GGPS1O95749 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
GGPS1O95749 LINC00896-202ENST00000609602 2128 ntBASIC19.28■□□□□ 0.68
GGPS1O95749 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.28■□□□□ 0.68
GGPS1O95749 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GGPS1O95749 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GGPS1O95749 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
GGPS1O95749 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
GGPS1O95749 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GGPS1O95749 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.27■□□□□ 0.68
GGPS1O95749 AC254562.1-201ENST00000417586 456 ntBASIC19.27■□□□□ 0.68
GGPS1O95749 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.27■□□□□ 0.68
GGPS1O95749 AL513480.1-201ENST00000451731 511 ntBASIC19.27■□□□□ 0.68
GGPS1O95749 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GGPS1O95749 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
GGPS1O95749 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
GGPS1O95749 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.27■□□□□ 0.68
GGPS1O95749 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GGPS1O95749 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.27■□□□□ 0.68
GGPS1O95749 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GGPS1O95749 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.27■□□□□ 0.67
GGPS1O95749 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
GGPS1O95749 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.27■□□□□ 0.67
GGPS1O95749 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
GGPS1O95749 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GGPS1O95749 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GGPS1O95749 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GGPS1O95749 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
GGPS1O95749 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.26■□□□□ 0.67
GGPS1O95749 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GGPS1O95749 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GGPS1O95749 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
GGPS1O95749 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
GGPS1O95749 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.26■□□□□ 0.67
GGPS1O95749 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.26■□□□□ 0.67
GGPS1O95749 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.26■□□□□ 0.67
GGPS1O95749 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.26■□□□□ 0.67
GGPS1O95749 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
GGPS1O95749 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.26■□□□□ 0.67
GGPS1O95749 AC091812.2-201ENST00000619081 385 ntBASIC19.26■□□□□ 0.67
GGPS1O95749 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GGPS1O95749 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.26■□□□□ 0.67
GGPS1O95749 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.26■□□□□ 0.67
GGPS1O95749 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GGPS1O95749 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.26■□□□□ 0.67
GGPS1O95749 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.25■□□□□ 0.67
GGPS1O95749 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
GGPS1O95749 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.25■□□□□ 0.67
GGPS1O95749 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.25■□□□□ 0.67
GGPS1O95749 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GGPS1O95749 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.25■□□□□ 0.67
GGPS1O95749 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.25■□□□□ 0.67
GGPS1O95749 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
GGPS1O95749 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.25■□□□□ 0.67
GGPS1O95749 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
GGPS1O95749 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.25■□□□□ 0.67
GGPS1O95749 AC068137.2-201ENST00000605408 478 ntBASIC19.25■□□□□ 0.67
GGPS1O95749 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms