Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC019129.2-201ENST00000609837 1235 ntBASIC17.31■□□□□ 0.36
GPC4O75487 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
GPC4O75487 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.31■□□□□ 0.36
GPC4O75487 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GPC4O75487 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GPC4O75487 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GPC4O75487 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GPC4O75487 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.3■□□□□ 0.36
GPC4O75487 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.3■□□□□ 0.36
GPC4O75487 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.3■□□□□ 0.36
GPC4O75487 RCN1P2-201ENST00000398357 915 ntBASIC17.3■□□□□ 0.36
GPC4O75487 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.3■□□□□ 0.36
GPC4O75487 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GPC4O75487 AC103564.2-201ENST00000432853 1299 ntBASIC17.3■□□□□ 0.36
GPC4O75487 NUS1P1-201ENST00000446295 882 ntBASIC17.3■□□□□ 0.36
GPC4O75487 AC002558.1-201ENST00000488906 803 ntBASIC17.3■□□□□ 0.36
GPC4O75487 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.3■□□□□ 0.36
GPC4O75487 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.3■□□□□ 0.36
GPC4O75487 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.3■□□□□ 0.36
GPC4O75487 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.3■□□□□ 0.36
GPC4O75487 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.3■□□□□ 0.36
GPC4O75487 AC099336.1-202ENST00000602961 463 ntBASIC17.3■□□□□ 0.36
GPC4O75487 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 AC114341.1-201ENST00000618070 349 ntBASIC17.3■□□□□ 0.36
GPC4O75487 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.3■□□□□ 0.36
GPC4O75487 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
GPC4O75487 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.3■□□□□ 0.36
GPC4O75487 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GPC4O75487 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.3■□□□□ 0.36
GPC4O75487 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.3■□□□□ 0.36
GPC4O75487 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.3■□□□□ 0.36
GPC4O75487 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
GPC4O75487 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC4O75487 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
GPC4O75487 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
GPC4O75487 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC4O75487 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GPC4O75487 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC4O75487 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 AC096582.2-201ENST00000510860 516 ntBASIC17.29■□□□□ 0.36
GPC4O75487 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.29■□□□□ 0.36
GPC4O75487 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC4O75487 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.29■□□□□ 0.36
GPC4O75487 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC4O75487 MIR3652-201ENST00000579335 131 ntBASIC17.29■□□□□ 0.36
GPC4O75487 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC4O75487 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC4O75487 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC4O75487 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.29■□□□□ 0.36
GPC4O75487 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GPC4O75487 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
GPC4O75487 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.28■□□□□ 0.36
GPC4O75487 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 AL049757.1-201ENST00000616842 1596 ntBASIC17.28■□□□□ 0.36
GPC4O75487 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC4O75487 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms