Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF254O75437 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF254O75437 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF254O75437 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF254O75437 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF254O75437 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF254O75437 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.31■□□□□ 0.04
ZNF254O75437 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF254O75437 LINC01238-205ENST00000567549 1107 ntBASIC15.31■□□□□ 0.04
ZNF254O75437 AC109462.3-201ENST00000573934 613 ntBASIC15.31■□□□□ 0.04
ZNF254O75437 AL353801.3-201ENST00000609898 542 ntBASIC15.31■□□□□ 0.04
ZNF254O75437 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF254O75437 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF254O75437 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 AC125634.1-201ENST00000438758 1403 ntBASIC15.31■□□□□ 0.04
ZNF254O75437 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF254O75437 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF254O75437 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF254O75437 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 FLJ38576-201ENST00000623820 2459 ntBASIC15.31■□□□□ 0.04
ZNF254O75437 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF254O75437 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
ZNF254O75437 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF254O75437 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ZNF254O75437 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF254O75437 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 SLC25A1P3-201ENST00000395415 828 ntBASIC15.3■□□□□ 0.04
ZNF254O75437 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF254O75437 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF254O75437 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 RN7SL606P-201ENST00000472779 293 ntBASIC15.3■□□□□ 0.04
ZNF254O75437 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF254O75437 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF254O75437 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF254O75437 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF254O75437 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.3■□□□□ 0.04
ZNF254O75437 AC090616.6-201ENST00000582640 721 ntBASIC15.3■□□□□ 0.04
ZNF254O75437 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ZNF254O75437 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF254O75437 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF254O75437 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF254O75437 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF254O75437 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF254O75437 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF254O75437 PCDH8P1-201ENST00000428983 2773 ntBASIC15.29■□□□□ 0.04
ZNF254O75437 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF254O75437 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
ZNF254O75437 KRT18P57-201ENST00000443599 1254 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms