Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE3O75131 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE3O75131 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CPNE3O75131 FER1L4-210ENST00000615531 5998 ntBASIC16.57■□□□□ 0.24
CPNE3O75131 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CPNE3O75131 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CPNE3O75131 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE3O75131 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE3O75131 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE3O75131 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CPNE3O75131 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CPNE3O75131 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.57■□□□□ 0.24
CPNE3O75131 KRT18P55-202ENST00000578578 1546 ntBASIC16.57■□□□□ 0.24
CPNE3O75131 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CPNE3O75131 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE3O75131 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.57■□□□□ 0.24
CPNE3O75131 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 AC108751.1-201ENST00000490852 363 ntBASIC16.57■□□□□ 0.24
CPNE3O75131 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CPNE3O75131 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE3O75131 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.57■□□□□ 0.24
CPNE3O75131 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.57■□□□□ 0.24
CPNE3O75131 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CPNE3O75131 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE3O75131 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CPNE3O75131 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CPNE3O75131 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.56■□□□□ 0.24
CPNE3O75131 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CPNE3O75131 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CPNE3O75131 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.56■□□□□ 0.24
CPNE3O75131 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.56■□□□□ 0.24
CPNE3O75131 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.56■□□□□ 0.24
CPNE3O75131 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CPNE3O75131 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.56■□□□□ 0.24
CPNE3O75131 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CPNE3O75131 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.56■□□□□ 0.24
CPNE3O75131 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.56■□□□□ 0.24
CPNE3O75131 ELK2BP-201ENST00000415014 1224 ntBASIC16.56■□□□□ 0.24
CPNE3O75131 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.56■□□□□ 0.24
CPNE3O75131 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.56■□□□□ 0.24
CPNE3O75131 AC040169.1-201ENST00000565382 521 ntBASIC16.56■□□□□ 0.24
CPNE3O75131 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.56■□□□□ 0.24
CPNE3O75131 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.56■□□□□ 0.24
CPNE3O75131 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CPNE3O75131 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CPNE3O75131 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.56■□□□□ 0.24
CPNE3O75131 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.56■□□□□ 0.24
CPNE3O75131 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE3O75131 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CPNE3O75131 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CPNE3O75131 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CPNE3O75131 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CPNE3O75131 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.55■□□□□ 0.24
CPNE3O75131 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms