Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 AC004817.3-201ENST00000602957 2129 ntBASIC15.37■□□□□ 0.05
PFDN1O60925 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.37■□□□□ 0.05
PFDN1O60925 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.37■□□□□ 0.05
PFDN1O60925 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.37■□□□□ 0.05
PFDN1O60925 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PFDN1O60925 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.37■□□□□ 0.05
PFDN1O60925 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PFDN1O60925 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PFDN1O60925 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PFDN1O60925 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.37■□□□□ 0.05
PFDN1O60925 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PFDN1O60925 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.37■□□□□ 0.05
PFDN1O60925 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.37■□□□□ 0.05
PFDN1O60925 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.36■□□□□ 0.05
PFDN1O60925 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.36■□□□□ 0.05
PFDN1O60925 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PFDN1O60925 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
PFDN1O60925 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.36■□□□□ 0.05
PFDN1O60925 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.36■□□□□ 0.05
PFDN1O60925 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.36■□□□□ 0.05
PFDN1O60925 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PFDN1O60925 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PFDN1O60925 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.36■□□□□ 0.05
PFDN1O60925 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.36■□□□□ 0.05
PFDN1O60925 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 MTHFR-217ENST00000641820 1569 ntBASIC15.36■□□□□ 0.05
PFDN1O60925 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PFDN1O60925 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PFDN1O60925 AC010327.5-201ENST00000586923 3061 ntBASIC15.35■□□□□ 0.05
PFDN1O60925 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
PFDN1O60925 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.35■□□□□ 0.05
PFDN1O60925 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PFDN1O60925 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 CYP21A1P-202ENST00000354927 1481 ntBASIC15.35■□□□□ 0.05
PFDN1O60925 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PFDN1O60925 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PFDN1O60925 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.35■□□□□ 0.05
PFDN1O60925 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PFDN1O60925 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 AC009299.2-201ENST00000482477 511 ntBASIC15.35■□□□□ 0.05
PFDN1O60925 DUX4L2-201ENST00000561772 1275 ntBASIC15.35■□□□□ 0.05
PFDN1O60925 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PFDN1O60925 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
PFDN1O60925 DUX4L6-201ENST00000626483 1275 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms