Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.15■□□□□ 0.18
HCN1O60741 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HCN1O60741 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HCN1O60741 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCN1O60741 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 AC011270.2-201ENST00000624293 2550 ntBASIC16.15■□□□□ 0.18
HCN1O60741 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.15■□□□□ 0.18
HCN1O60741 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.15■□□□□ 0.18
HCN1O60741 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HCN1O60741 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
HCN1O60741 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
HCN1O60741 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
HCN1O60741 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HCN1O60741 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HCN1O60741 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.14■□□□□ 0.17
HCN1O60741 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HCN1O60741 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.14■□□□□ 0.17
HCN1O60741 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.14■□□□□ 0.17
HCN1O60741 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.14■□□□□ 0.17
HCN1O60741 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.14■□□□□ 0.17
HCN1O60741 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
HCN1O60741 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HCN1O60741 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.14■□□□□ 0.17
HCN1O60741 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCN1O60741 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.13■□□□□ 0.17
HCN1O60741 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.13■□□□□ 0.17
HCN1O60741 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
HCN1O60741 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.13■□□□□ 0.17
HCN1O60741 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.13■□□□□ 0.17
HCN1O60741 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.13■□□□□ 0.17
HCN1O60741 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
HCN1O60741 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.13■□□□□ 0.17
HCN1O60741 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
HCN1O60741 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 SLC25A6P4-201ENST00000586535 553 ntBASIC16.13■□□□□ 0.17
HCN1O60741 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.13■□□□□ 0.17
HCN1O60741 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.13■□□□□ 0.17
HCN1O60741 AC008608.2-201ENST00000606089 416 ntBASIC16.13■□□□□ 0.17
HCN1O60741 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms