Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.3■□□□□ 0.04
GMDSO60547 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.3■□□□□ 0.04
GMDSO60547 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 HLA-J-201ENST00000462773 1622 ntBASIC15.3■□□□□ 0.04
GMDSO60547 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.3■□□□□ 0.04
GMDSO60547 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
GMDSO60547 AC112698.1-201ENST00000510299 916 ntBASIC15.3■□□□□ 0.04
GMDSO60547 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.3■□□□□ 0.04
GMDSO60547 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.3■□□□□ 0.04
GMDSO60547 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.3■□□□□ 0.04
GMDSO60547 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.3■□□□□ 0.04
GMDSO60547 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.3■□□□□ 0.04
GMDSO60547 AC005332.1-201ENST00000577698 1310 ntBASIC15.3■□□□□ 0.04
GMDSO60547 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.3■□□□□ 0.04
GMDSO60547 AC090616.6-201ENST00000582640 721 ntBASIC15.3■□□□□ 0.04
GMDSO60547 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.3■□□□□ 0.04
GMDSO60547 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.3■□□□□ 0.04
GMDSO60547 REXO1L11P-201ENST00000620964 1927 ntBASIC15.3■□□□□ 0.04
GMDSO60547 LINC01451-201ENST00000623792 534 ntBASIC15.3■□□□□ 0.04
GMDSO60547 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.29■□□□□ 0.04
GMDSO60547 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.29■□□□□ 0.04
GMDSO60547 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.29■□□□□ 0.04
GMDSO60547 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GMDSO60547 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.29■□□□□ 0.04
GMDSO60547 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.29■□□□□ 0.04
GMDSO60547 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GMDSO60547 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.29■□□□□ 0.04
GMDSO60547 KRT8P26-201ENST00000534154 1276 ntBASIC15.29■□□□□ 0.04
GMDSO60547 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.29■□□□□ 0.04
GMDSO60547 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.29■□□□□ 0.04
GMDSO60547 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
GMDSO60547 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GMDSO60547 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.29■□□□□ 0.04
GMDSO60547 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.29■□□□□ 0.04
GMDSO60547 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GMDSO60547 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.29■□□□□ 0.04
GMDSO60547 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GMDSO60547 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
GMDSO60547 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.29■□□□□ 0.04
GMDSO60547 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GMDSO60547 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
GMDSO60547 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GMDSO60547 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.28■□□□□ 0.04
GMDSO60547 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 OR6D1P-203ENST00000641209 4860 ntBASIC15.28■□□□□ 0.04
GMDSO60547 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
GMDSO60547 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.28■□□□□ 0.04
GMDSO60547 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.28■□□□□ 0.04
GMDSO60547 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.28■□□□□ 0.04
GMDSO60547 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 MIR1224-201ENST00000408193 85 ntBASIC15.28■□□□□ 0.04
GMDSO60547 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.28■□□□□ 0.04
GMDSO60547 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
GMDSO60547 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
GMDSO60547 BX276092.5-203ENST00000456199 560 ntBASIC15.28■□□□□ 0.04
GMDSO60547 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms