Protein–RNA interactions for Protein: Q9UNX4

WDR3, WD repeat-containing protein 3, humanhuman

Known RBP eCLIP

Length 943 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR3Q9UNX4 PRSS21-210ENST00000577043 814 ntTSL 519.74■□□□□ 0.752e-7■■□□□ 14.5
WDR3Q9UNX4 PRSS21-203ENST00000570594 809 ntTSL 319.29■□□□□ 0.682e-7■■□□□ 14.5
WDR3Q9UNX4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.94■□□□□ 0.462e-7■■□□□ 14.5
WDR3Q9UNX4 PRSS21-206ENST00000574265 860 ntTSL 313.39□□□□□ -0.272e-7■■□□□ 14.5
WDR3Q9UNX4 PRSS21-204ENST00000570629 626 ntTSL 213.09□□□□□ -0.312e-7■■□□□ 14.5
WDR3Q9UNX4 PRSS21-209ENST00000575739 378 ntTSL 39.42□□□□□ -0.92e-7■■□□□ 14.5
WDR3Q9UNX4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.38■■□□□ 1.011e-7■■□□□ 14.4
WDR3Q9UNX4 UNKL-206ENST00000402641 669 ntTSL 319.25■□□□□ 0.671e-7■■□□□ 14.4
WDR3Q9UNX4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.621e-7■■□□□ 14.4
WDR3Q9UNX4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.91■□□□□ 0.141e-7■■□□□ 14.4
WDR3Q9UNX4 UNKL-207ENST00000403703 4281 ntTSL 1 (best)14.86□□□□□ -0.031e-7■■□□□ 14.4
WDR3Q9UNX4 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.311e-7■■□□□ 14.4
WDR3Q9UNX4 SEMA4C-202ENST00000442264 817 ntTSL 321.47■■□□□ 1.033e-6■■□□□ 14.2
WDR3Q9UNX4 ULK1-204ENST00000540647 1211 ntTSL 220.58■□□□□ 0.893e-6■■□□□ 14.2
WDR3Q9UNX4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.743e-6■■□□□ 14.2
WDR3Q9UNX4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.473e-6■■□□□ 14.2
WDR3Q9UNX4 TIMM23B-204ENST00000483296 1156 ntTSL 217.69■□□□□ 0.423e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-210ENST00000496044 673 ntTSL 217.62■□□□□ 0.413e-6■■□□□ 14.2
WDR3Q9UNX4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.353e-6■■□□□ 14.2
WDR3Q9UNX4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.273e-6■■□□□ 14.2
WDR3Q9UNX4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.253e-6■■□□□ 14.2
WDR3Q9UNX4 ULK1-205ENST00000541761 1262 ntTSL 216.5■□□□□ 0.233e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-207ENST00000487374 469 ntTSL 516.32■□□□□ 0.23e-6■■□□□ 14.2
WDR3Q9UNX4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.183e-6■■□□□ 14.2
WDR3Q9UNX4 SEMA4C-203ENST00000449330 839 ntTSL 315.39■□□□□ 0.053e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.033e-6■■□□□ 14.2
WDR3Q9UNX4 LENG8-203ENST00000421200 594 ntTSL 315.18■□□□□ 0.023e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-208ENST00000491703 2839 ntTSL 214.94□□□□□ -0.023e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.033e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.083e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-209ENST00000439106 891 ntAPPRIS ALT2 TSL 314.52□□□□□ -0.093e-6■■□□□ 14.2
WDR3Q9UNX4 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.153e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.223e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.223e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-213ENST00000492657 2831 ntTSL 1 (best)13.52□□□□□ -0.253e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.263e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-207ENST00000420709 705 ntAPPRIS ALT2 TSL 213.37□□□□□ -0.273e-6■■□□□ 14.2
WDR3Q9UNX4 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC12.63□□□□□ -0.393e-6■■□□□ 14.2
WDR3Q9UNX4 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.413e-6■■□□□ 14.2
WDR3Q9UNX4 TIMM23B-203ENST00000478381 2623 ntTSL 212.28□□□□□ -0.443e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-209ENST00000495005 586 ntTSL 210.62□□□□□ -0.713e-6■■□□□ 14.2
WDR3Q9UNX4 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.793e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.793e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-205ENST00000431254 583 ntTSL 210.09□□□□□ -0.793e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-206ENST00000484627 157 ntTSL 1 (best)7.64□□□□□ -1.193e-6■■□□□ 14.2
WDR3Q9UNX4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.764e-6■■□□□ 14.2
WDR3Q9UNX4 PSME4-208ENST00000481518 886 ntTSL 524.16■■□□□ 1.461e-12■■□□□ 13.8
WDR3Q9UNX4 PSME4-201ENST00000389993 6581 ntTSL 1 (best)15.13■□□□□ 0.011e-12■■□□□ 13.8
WDR3Q9UNX4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.131e-12■■□□□ 13.8
WDR3Q9UNX4 OAZ1-208ENST00000592727 726 ntTSL 215.85■□□□□ 0.139e-8■■□□□ 13.6
WDR3Q9UNX4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.971e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.971e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-215ENST00000523922 493 ntTSL 323.54■■□□□ 1.361e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-205ENST00000503110 587 ntTSL 520.64■□□□□ 0.891e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-202ENST00000425155 2329 ntTSL 220.33■□□□□ 0.841e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.62■□□□□ 0.731e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.711e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-211ENST00000512490 565 ntTSL 219.36■□□□□ 0.691e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-210ENST00000520454 488 ntTSL 319.26■□□□□ 0.671e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.531e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-209ENST00000511890 1536 ntTSL 1 (best)17.82■□□□□ 0.441e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-210ENST00000512000 559 ntTSL 316.97■□□□□ 0.311e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-213ENST00000514713 817 ntTSL 1 (best)16.49■□□□□ 0.231e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.21e-6■■□□□ 13.2
WDR3Q9UNX4 LINC01029-203ENST00000582805 788 ntTSL 1 (best)15.2■□□□□ 0.023e-9■■□□□ 13.2
WDR3Q9UNX4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.08■□□□□ 0.013e-9■■□□□ 13.2
WDR3Q9UNX4 ZNF706-208ENST00000519916 597 ntTSL 210.5□□□□□ -0.731e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.261e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-214ENST00000523146 476 ntTSL 53.62□□□□□ -1.831e-6■■□□□ 13.2
WDR3Q9UNX4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.85■■□□□ 1.413e-6■■□□□ 13
WDR3Q9UNX4 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)18.96■□□□□ 0.633e-6■■□□□ 13
WDR3Q9UNX4 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.32□□□□□ -1.083e-6■■□□□ 13
WDR3Q9UNX4 IGFL2-AS1-201ENST00000594027 294 ntTSL 311.66□□□□□ -0.544e-8■■□□□ 12.9
WDR3Q9UNX4 IGFL2-AS1-205ENST00000599817 340 ntTSL 211.39□□□□□ -0.594e-8■■□□□ 12.9
WDR3Q9UNX4 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC10.8□□□□□ -0.684e-8■■□□□ 12.9
WDR3Q9UNX4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.993e-7■■□□□ 12.6
WDR3Q9UNX4 UBAC1-202ENST00000465873 882 ntTSL 217.06■□□□□ 0.323e-7■■□□□ 12.6
WDR3Q9UNX4 UBAC1-206ENST00000489050 864 ntTSL 310.19□□□□□ -0.783e-7■■□□□ 12.6
WDR3Q9UNX4 STAT5B-203ENST00000468312 1799 ntTSL 1 (best)24.47■■□□□ 1.514e-6■■□□□ 12.5
WDR3Q9UNX4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.154e-6■■□□□ 12.5
WDR3Q9UNX4 STAT5B-202ENST00000415845 559 ntTSL 47.34□□□□□ -1.234e-6■■□□□ 12.5
WDR3Q9UNX4 TRIM28-204ENST00000594806 861 ntTSL 527.21■■□□□ 1.955e-7■■□□□ 12.4
WDR3Q9UNX4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.93■■□□□ 1.425e-7■■□□□ 12.4
WDR3Q9UNX4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.155e-7■■□□□ 12.4
WDR3Q9UNX4 TRIM28-203ENST00000593582 533 ntTSL 316.02■□□□□ 0.165e-7■■□□□ 12.4
WDR3Q9UNX4 TRIM28-211ENST00000597968 504 ntTSL 214.19□□□□□ -0.145e-7■■□□□ 12.4
WDR3Q9UNX4 ADARB1-208ENST00000462214 587 ntTSL 38.69□□□□□ -1.025e-7■■□□□ 12.4
WDR3Q9UNX4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.583e-23■■□□□ 11.9
WDR3Q9UNX4 RPS12-202ENST00000484616 639 ntTSL 24.18□□□□□ -1.743e-23■■□□□ 11.9
WDR3Q9UNX4 SNORD101-201ENST00000384027 73 ntBASIC0.98□□□□□ -2.253e-23■■□□□ 11.9
WDR3Q9UNX4 ILF3-216ENST00000589600 839 ntTSL 526.03■■□□□ 1.767e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.67e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-211ENST00000594537 657 ntTSL 524.53■■□□□ 1.527e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-224ENST00000599016 726 ntTSL 323.19■■□□□ 1.37e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-227ENST00000600026 723 ntTSL 323.19■■□□□ 1.37e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.297e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.81■■□□□ 1.247e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-205ENST00000523147 558 ntTSL 521.96■■□□□ 1.117e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.17e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.78■■□□□ 1.087e-6■■□□□ 11.9
Retrieved 100 of 1,750 protein–RNA pairs in 17.5 ms