Protein–RNA interactions for Protein: Q9UNX4

WDR3, WD repeat-containing protein 3, humanhuman

Known RBP eCLIP

Length 943 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR3Q9UNX4 PRSS21-210ENST00000577043 814 ntTSL 519.74■□□□□ 0.752e-7■■□□□ 14.5
WDR3Q9UNX4 PRSS21-203ENST00000570594 809 ntTSL 319.29■□□□□ 0.682e-7■■□□□ 14.5
WDR3Q9UNX4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.94■□□□□ 0.462e-7■■□□□ 14.5
WDR3Q9UNX4 PRSS21-206ENST00000574265 860 ntTSL 313.39□□□□□ -0.272e-7■■□□□ 14.5
WDR3Q9UNX4 PRSS21-204ENST00000570629 626 ntTSL 213.09□□□□□ -0.312e-7■■□□□ 14.5
WDR3Q9UNX4 PRSS21-209ENST00000575739 378 ntTSL 39.42□□□□□ -0.92e-7■■□□□ 14.5
WDR3Q9UNX4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.38■■□□□ 1.011e-7■■□□□ 14.4
WDR3Q9UNX4 UNKL-206ENST00000402641 669 ntTSL 319.25■□□□□ 0.671e-7■■□□□ 14.4
WDR3Q9UNX4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.621e-7■■□□□ 14.4
WDR3Q9UNX4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.91■□□□□ 0.141e-7■■□□□ 14.4
WDR3Q9UNX4 UNKL-207ENST00000403703 4281 ntTSL 1 (best)14.86□□□□□ -0.031e-7■■□□□ 14.4
WDR3Q9UNX4 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.311e-7■■□□□ 14.4
WDR3Q9UNX4 SEMA4C-202ENST00000442264 817 ntTSL 321.47■■□□□ 1.033e-6■■□□□ 14.2
WDR3Q9UNX4 ULK1-204ENST00000540647 1211 ntTSL 220.58■□□□□ 0.893e-6■■□□□ 14.2
WDR3Q9UNX4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.743e-6■■□□□ 14.2
WDR3Q9UNX4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.473e-6■■□□□ 14.2
WDR3Q9UNX4 TIMM23B-204ENST00000483296 1156 ntTSL 217.69■□□□□ 0.423e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-210ENST00000496044 673 ntTSL 217.62■□□□□ 0.413e-6■■□□□ 14.2
WDR3Q9UNX4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.353e-6■■□□□ 14.2
WDR3Q9UNX4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.273e-6■■□□□ 14.2
WDR3Q9UNX4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.253e-6■■□□□ 14.2
WDR3Q9UNX4 ULK1-205ENST00000541761 1262 ntTSL 216.5■□□□□ 0.233e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-207ENST00000487374 469 ntTSL 516.32■□□□□ 0.23e-6■■□□□ 14.2
WDR3Q9UNX4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.183e-6■■□□□ 14.2
WDR3Q9UNX4 SEMA4C-203ENST00000449330 839 ntTSL 315.39■□□□□ 0.053e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.033e-6■■□□□ 14.2
WDR3Q9UNX4 LENG8-203ENST00000421200 594 ntTSL 315.18■□□□□ 0.023e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-208ENST00000491703 2839 ntTSL 214.94□□□□□ -0.023e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.033e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.083e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-209ENST00000439106 891 ntAPPRIS ALT2 TSL 314.52□□□□□ -0.093e-6■■□□□ 14.2
WDR3Q9UNX4 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.153e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.223e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.223e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-213ENST00000492657 2831 ntTSL 1 (best)13.52□□□□□ -0.253e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.263e-6■■□□□ 14.2
WDR3Q9UNX4 PRAME-207ENST00000420709 705 ntAPPRIS ALT2 TSL 213.37□□□□□ -0.273e-6■■□□□ 14.2
WDR3Q9UNX4 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC12.63□□□□□ -0.393e-6■■□□□ 14.2
WDR3Q9UNX4 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.413e-6■■□□□ 14.2
WDR3Q9UNX4 TIMM23B-203ENST00000478381 2623 ntTSL 212.28□□□□□ -0.443e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-209ENST00000495005 586 ntTSL 210.62□□□□□ -0.713e-6■■□□□ 14.2
WDR3Q9UNX4 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.793e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.793e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-205ENST00000431254 583 ntTSL 210.09□□□□□ -0.793e-6■■□□□ 14.2
WDR3Q9UNX4 ATP5O-206ENST00000484627 157 ntTSL 1 (best)7.64□□□□□ -1.193e-6■■□□□ 14.2
WDR3Q9UNX4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.764e-6■■□□□ 14.2
WDR3Q9UNX4 PSME4-208ENST00000481518 886 ntTSL 524.16■■□□□ 1.461e-12■■□□□ 13.8
WDR3Q9UNX4 PSME4-201ENST00000389993 6581 ntTSL 1 (best)15.13■□□□□ 0.011e-12■■□□□ 13.8
WDR3Q9UNX4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.131e-12■■□□□ 13.8
WDR3Q9UNX4 OAZ1-208ENST00000592727 726 ntTSL 215.85■□□□□ 0.139e-8■■□□□ 13.6
WDR3Q9UNX4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.971e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.971e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-215ENST00000523922 493 ntTSL 323.54■■□□□ 1.361e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-205ENST00000503110 587 ntTSL 520.64■□□□□ 0.891e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-202ENST00000425155 2329 ntTSL 220.33■□□□□ 0.841e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.62■□□□□ 0.731e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.711e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-211ENST00000512490 565 ntTSL 219.36■□□□□ 0.691e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-210ENST00000520454 488 ntTSL 319.26■□□□□ 0.671e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.531e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-209ENST00000511890 1536 ntTSL 1 (best)17.82■□□□□ 0.441e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-210ENST00000512000 559 ntTSL 316.97■□□□□ 0.311e-6■■□□□ 13.2
WDR3Q9UNX4 RGS14-213ENST00000514713 817 ntTSL 1 (best)16.49■□□□□ 0.231e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.21e-6■■□□□ 13.2
WDR3Q9UNX4 LINC01029-203ENST00000582805 788 ntTSL 1 (best)15.2■□□□□ 0.023e-9■■□□□ 13.2
WDR3Q9UNX4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.08■□□□□ 0.013e-9■■□□□ 13.2
WDR3Q9UNX4 ZNF706-208ENST00000519916 597 ntTSL 210.5□□□□□ -0.731e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.261e-6■■□□□ 13.2
WDR3Q9UNX4 ZNF706-214ENST00000523146 476 ntTSL 53.62□□□□□ -1.831e-6■■□□□ 13.2
WDR3Q9UNX4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.85■■□□□ 1.413e-6■■□□□ 13
WDR3Q9UNX4 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)18.96■□□□□ 0.633e-6■■□□□ 13
WDR3Q9UNX4 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.32□□□□□ -1.083e-6■■□□□ 13
WDR3Q9UNX4 IGFL2-AS1-201ENST00000594027 294 ntTSL 311.66□□□□□ -0.544e-8■■□□□ 12.9
WDR3Q9UNX4 IGFL2-AS1-205ENST00000599817 340 ntTSL 211.39□□□□□ -0.594e-8■■□□□ 12.9
WDR3Q9UNX4 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC10.8□□□□□ -0.684e-8■■□□□ 12.9
WDR3Q9UNX4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.993e-7■■□□□ 12.6
WDR3Q9UNX4 UBAC1-202ENST00000465873 882 ntTSL 217.06■□□□□ 0.323e-7■■□□□ 12.6
WDR3Q9UNX4 UBAC1-206ENST00000489050 864 ntTSL 310.19□□□□□ -0.783e-7■■□□□ 12.6
WDR3Q9UNX4 STAT5B-203ENST00000468312 1799 ntTSL 1 (best)24.47■■□□□ 1.514e-6■■□□□ 12.5
WDR3Q9UNX4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.154e-6■■□□□ 12.5
WDR3Q9UNX4 STAT5B-202ENST00000415845 559 ntTSL 47.34□□□□□ -1.234e-6■■□□□ 12.5
WDR3Q9UNX4 TRIM28-204ENST00000594806 861 ntTSL 527.21■■□□□ 1.955e-7■■□□□ 12.4
WDR3Q9UNX4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.93■■□□□ 1.425e-7■■□□□ 12.4
WDR3Q9UNX4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.155e-7■■□□□ 12.4
WDR3Q9UNX4 TRIM28-203ENST00000593582 533 ntTSL 316.02■□□□□ 0.165e-7■■□□□ 12.4
WDR3Q9UNX4 TRIM28-211ENST00000597968 504 ntTSL 214.19□□□□□ -0.145e-7■■□□□ 12.4
WDR3Q9UNX4 ADARB1-208ENST00000462214 587 ntTSL 38.69□□□□□ -1.025e-7■■□□□ 12.4
WDR3Q9UNX4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.583e-23■■□□□ 11.9
WDR3Q9UNX4 RPS12-202ENST00000484616 639 ntTSL 24.18□□□□□ -1.743e-23■■□□□ 11.9
WDR3Q9UNX4 SNORD101-201ENST00000384027 73 ntBASIC0.98□□□□□ -2.253e-23■■□□□ 11.9
WDR3Q9UNX4 ILF3-216ENST00000589600 839 ntTSL 526.03■■□□□ 1.767e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.67e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-211ENST00000594537 657 ntTSL 524.53■■□□□ 1.527e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-224ENST00000599016 726 ntTSL 323.19■■□□□ 1.37e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-227ENST00000600026 723 ntTSL 323.19■■□□□ 1.37e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.297e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.81■■□□□ 1.247e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-205ENST00000523147 558 ntTSL 521.96■■□□□ 1.117e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.17e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.78■■□□□ 1.087e-6■■□□□ 11.9
Retrieved 100 of 1,750 protein–RNA pairs in 159.8 ms