Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RFFLQ8WZ73 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RFFLQ8WZ73 AC096887.2-201ENST00000623443 1957 ntBASIC25.67■■□□□ 1.7
RFFLQ8WZ73 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RFFLQ8WZ73 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.67■■□□□ 1.7
RFFLQ8WZ73 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
RFFLQ8WZ73 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.67■■□□□ 1.7
RFFLQ8WZ73 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RFFLQ8WZ73 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.67■■□□□ 1.7
RFFLQ8WZ73 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RFFLQ8WZ73 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
RFFLQ8WZ73 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
RFFLQ8WZ73 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
RFFLQ8WZ73 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RFFLQ8WZ73 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
RFFLQ8WZ73 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RFFLQ8WZ73 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
RFFLQ8WZ73 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.64■■□□□ 1.7
RFFLQ8WZ73 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
RFFLQ8WZ73 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RFFLQ8WZ73 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RFFLQ8WZ73 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
RFFLQ8WZ73 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.63■■□□□ 1.69
RFFLQ8WZ73 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.63■■□□□ 1.69
RFFLQ8WZ73 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
RFFLQ8WZ73 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RFFLQ8WZ73 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
RFFLQ8WZ73 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RFFLQ8WZ73 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFFLQ8WZ73 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFFLQ8WZ73 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.62■■□□□ 1.69
RFFLQ8WZ73 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFFLQ8WZ73 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RFFLQ8WZ73 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.61■■□□□ 1.69
RFFLQ8WZ73 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.61■■□□□ 1.69
RFFLQ8WZ73 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
RFFLQ8WZ73 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RFFLQ8WZ73 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.61■■□□□ 1.69
RFFLQ8WZ73 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RFFLQ8WZ73 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFFLQ8WZ73 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.6■■□□□ 1.69
RFFLQ8WZ73 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
RFFLQ8WZ73 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFFLQ8WZ73 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.6■■□□□ 1.69
RFFLQ8WZ73 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.6■■□□□ 1.69
RFFLQ8WZ73 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFFLQ8WZ73 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.6■■□□□ 1.69
RFFLQ8WZ73 AC142381.3-201ENST00000568208 1670 ntBASIC25.59■■□□□ 1.69
RFFLQ8WZ73 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RFFLQ8WZ73 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RFFLQ8WZ73 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RFFLQ8WZ73 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RFFLQ8WZ73 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.58■■□□□ 1.69
RFFLQ8WZ73 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
RFFLQ8WZ73 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.58■■□□□ 1.69
RFFLQ8WZ73 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
RFFLQ8WZ73 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
RFFLQ8WZ73 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RFFLQ8WZ73 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.56■■□□□ 1.68
RFFLQ8WZ73 AC093323.1-202ENST00000635031 2045 ntBASIC25.56■■□□□ 1.68
RFFLQ8WZ73 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RFFLQ8WZ73 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
RFFLQ8WZ73 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
RFFLQ8WZ73 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RFFLQ8WZ73 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RFFLQ8WZ73 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.55■■□□□ 1.68
RFFLQ8WZ73 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
RFFLQ8WZ73 AC126177.7-201ENST00000547904 679 ntBASIC25.55■■□□□ 1.68
RFFLQ8WZ73 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RFFLQ8WZ73 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RFFLQ8WZ73 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RFFLQ8WZ73 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RFFLQ8WZ73 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RFFLQ8WZ73 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.54■■□□□ 1.68
RFFLQ8WZ73 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.54■■□□□ 1.68
RFFLQ8WZ73 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RFFLQ8WZ73 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.54■■□□□ 1.68
RFFLQ8WZ73 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RFFLQ8WZ73 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RFFLQ8WZ73 AC022211.4-201ENST00000625094 2161 ntBASIC25.54■■□□□ 1.68
RFFLQ8WZ73 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
RFFLQ8WZ73 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFFLQ8WZ73 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.53■■□□□ 1.68
RFFLQ8WZ73 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFFLQ8WZ73 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFFLQ8WZ73 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RFFLQ8WZ73 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFFLQ8WZ73 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RFFLQ8WZ73 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RFFLQ8WZ73 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RFFLQ8WZ73 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.52■■□□□ 1.68
RFFLQ8WZ73 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.52■■□□□ 1.68
RFFLQ8WZ73 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.52■■□□□ 1.68
RFFLQ8WZ73 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFFLQ8WZ73 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFFLQ8WZ73 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RFFLQ8WZ73 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFFLQ8WZ73 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFFLQ8WZ73 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFFLQ8WZ73 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms