Protein–RNA interactions for Protein: Q8N5H7

SH2D3C, SH2 domain-containing protein 3C, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3CQ8N5H7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SH2D3CQ8N5H7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SH2D3CQ8N5H7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.47■■□□□ 1.67
SH2D3CQ8N5H7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SH2D3CQ8N5H7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SH2D3CQ8N5H7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.46■■□□□ 1.67
SH2D3CQ8N5H7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.46■■□□□ 1.67
SH2D3CQ8N5H7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SH2D3CQ8N5H7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SH2D3CQ8N5H7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SH2D3CQ8N5H7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.45■■□□□ 1.67
SH2D3CQ8N5H7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
SH2D3CQ8N5H7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SH2D3CQ8N5H7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SH2D3CQ8N5H7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.45■■□□□ 1.66
SH2D3CQ8N5H7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SH2D3CQ8N5H7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
SH2D3CQ8N5H7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH2D3CQ8N5H7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH2D3CQ8N5H7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SH2D3CQ8N5H7 AC092803.2-201ENST00000564287 1899 ntBASIC25.44■■□□□ 1.66
SH2D3CQ8N5H7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH2D3CQ8N5H7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SH2D3CQ8N5H7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.43■■□□□ 1.66
SH2D3CQ8N5H7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.43■■□□□ 1.66
SH2D3CQ8N5H7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SH2D3CQ8N5H7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
SH2D3CQ8N5H7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SH2D3CQ8N5H7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SH2D3CQ8N5H7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SH2D3CQ8N5H7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SH2D3CQ8N5H7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SH2D3CQ8N5H7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.41■■□□□ 1.66
SH2D3CQ8N5H7 AC092296.2-201ENST00000589470 999 ntBASIC25.41■■□□□ 1.66
SH2D3CQ8N5H7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH2D3CQ8N5H7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH2D3CQ8N5H7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH2D3CQ8N5H7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH2D3CQ8N5H7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SH2D3CQ8N5H7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH2D3CQ8N5H7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH2D3CQ8N5H7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
SH2D3CQ8N5H7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.39■■□□□ 1.66
SH2D3CQ8N5H7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SH2D3CQ8N5H7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SH2D3CQ8N5H7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SH2D3CQ8N5H7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SH2D3CQ8N5H7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH2D3CQ8N5H7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH2D3CQ8N5H7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D3CQ8N5H7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D3CQ8N5H7 AL359258.2-201ENST00000564063 1566 ntBASIC25.37■■□□□ 1.65
SH2D3CQ8N5H7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D3CQ8N5H7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
SH2D3CQ8N5H7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.36■■□□□ 1.65
SH2D3CQ8N5H7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SH2D3CQ8N5H7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SH2D3CQ8N5H7 AL157400.5-201ENST00000507624 621 ntBASIC25.35■■□□□ 1.65
SH2D3CQ8N5H7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SH2D3CQ8N5H7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D3CQ8N5H7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D3CQ8N5H7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D3CQ8N5H7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D3CQ8N5H7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D3CQ8N5H7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
SH2D3CQ8N5H7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D3CQ8N5H7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
SH2D3CQ8N5H7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SH2D3CQ8N5H7 ABHD17AP5-201ENST00000580133 923 ntBASIC25.33■■□□□ 1.65
SH2D3CQ8N5H7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.33■■□□□ 1.65
SH2D3CQ8N5H7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SH2D3CQ8N5H7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.32■■□□□ 1.64
SH2D3CQ8N5H7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SH2D3CQ8N5H7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SH2D3CQ8N5H7 ECEL1P2-201ENST00000461596 1295 ntBASIC25.32■■□□□ 1.64
SH2D3CQ8N5H7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
SH2D3CQ8N5H7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D3CQ8N5H7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.31■■□□□ 1.64
SH2D3CQ8N5H7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.31■■□□□ 1.64
SH2D3CQ8N5H7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D3CQ8N5H7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D3CQ8N5H7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
SH2D3CQ8N5H7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D3CQ8N5H7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH2D3CQ8N5H7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH2D3CQ8N5H7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH2D3CQ8N5H7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.3■■□□□ 1.64
SH2D3CQ8N5H7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH2D3CQ8N5H7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.3■■□□□ 1.64
SH2D3CQ8N5H7 ERN1-208ENST00000606895 2068 ntBASIC25.29■■□□□ 1.64
SH2D3CQ8N5H7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SH2D3CQ8N5H7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SH2D3CQ8N5H7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.29■■□□□ 1.64
SH2D3CQ8N5H7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH2D3CQ8N5H7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.28■■□□□ 1.64
SH2D3CQ8N5H7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH2D3CQ8N5H7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH2D3CQ8N5H7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH2D3CQ8N5H7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH2D3CQ8N5H7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms