Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
SHC4Q6S5L8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.4■■□□□ 1.98
SHC4Q6S5L8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SHC4Q6S5L8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SHC4Q6S5L8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SHC4Q6S5L8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.39■■□□□ 1.98
SHC4Q6S5L8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.97
SHC4Q6S5L8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SHC4Q6S5L8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
SHC4Q6S5L8 AL157400.5-201ENST00000507624 621 ntBASIC27.38■■□□□ 1.97
SHC4Q6S5L8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.38■■□□□ 1.97
SHC4Q6S5L8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.38■■□□□ 1.97
SHC4Q6S5L8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SHC4Q6S5L8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SHC4Q6S5L8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.38■■□□□ 1.97
SHC4Q6S5L8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SHC4Q6S5L8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
SHC4Q6S5L8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SHC4Q6S5L8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.37■■□□□ 1.97
SHC4Q6S5L8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.36■■□□□ 1.97
SHC4Q6S5L8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SHC4Q6S5L8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.36■■□□□ 1.97
SHC4Q6S5L8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
SHC4Q6S5L8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SHC4Q6S5L8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SHC4Q6S5L8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SHC4Q6S5L8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.34■■□□□ 1.97
SHC4Q6S5L8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SHC4Q6S5L8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
SHC4Q6S5L8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SHC4Q6S5L8 MIR639-201ENST00000384974 98 ntBASIC27.33■■□□□ 1.97
SHC4Q6S5L8 AC060814.1-201ENST00000554326 538 ntBASIC27.33■■□□□ 1.97
SHC4Q6S5L8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.33■■□□□ 1.97
SHC4Q6S5L8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.33■■□□□ 1.97
SHC4Q6S5L8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
SHC4Q6S5L8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
SHC4Q6S5L8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SHC4Q6S5L8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.32■■□□□ 1.96
SHC4Q6S5L8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
SHC4Q6S5L8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SHC4Q6S5L8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
SHC4Q6S5L8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.32■■□□□ 1.96
SHC4Q6S5L8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SHC4Q6S5L8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SHC4Q6S5L8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.3■■□□□ 1.96
SHC4Q6S5L8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
SHC4Q6S5L8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SHC4Q6S5L8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHC4Q6S5L8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHC4Q6S5L8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.29■■□□□ 1.96
SHC4Q6S5L8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHC4Q6S5L8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
SHC4Q6S5L8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.29■■□□□ 1.96
SHC4Q6S5L8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHC4Q6S5L8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHC4Q6S5L8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHC4Q6S5L8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHC4Q6S5L8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SHC4Q6S5L8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHC4Q6S5L8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SHC4Q6S5L8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SHC4Q6S5L8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.27■■□□□ 1.96
SHC4Q6S5L8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHC4Q6S5L8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHC4Q6S5L8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SHC4Q6S5L8 AC025884.2-201ENST00000553429 711 ntBASIC27.27■■□□□ 1.96
SHC4Q6S5L8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.27■■□□□ 1.96
SHC4Q6S5L8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHC4Q6S5L8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SHC4Q6S5L8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SHC4Q6S5L8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHC4Q6S5L8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.26■■□□□ 1.95
SHC4Q6S5L8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.26■■□□□ 1.95
SHC4Q6S5L8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SHC4Q6S5L8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SHC4Q6S5L8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SHC4Q6S5L8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHC4Q6S5L8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHC4Q6S5L8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.25■■□□□ 1.95
SHC4Q6S5L8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHC4Q6S5L8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SHC4Q6S5L8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SHC4Q6S5L8 AC022211.4-201ENST00000625094 2161 ntBASIC27.24■■□□□ 1.95
SHC4Q6S5L8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.24■■□□□ 1.95
SHC4Q6S5L8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
SHC4Q6S5L8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SHC4Q6S5L8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms