Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YMR295CYMR295C 594 nt6□□□□□ -1.45
RRP40Q08285 RAP1YNL216W 2484 nt6□□□□□ -1.45
RRP40Q08285 PEX3YDR329C 1326 nt5.99□□□□□ -1.45
RRP40Q08285 ALT2YDR111C 1524 nt5.99□□□□□ -1.45
RRP40Q08285 CCC2YDR270W 3015 nt5.99□□□□□ -1.45
RRP40Q08285 YGR127WYGR127W 939 nt5.99□□□□□ -1.45
RRP40Q08285 YJR084WYJR084W 1272 nt5.99□□□□□ -1.45
RRP40Q08285 YLR123CYLR123C 330 nt5.99□□□□□ -1.45
RRP40Q08285 GLC8YMR311C 690 nt5.99□□□□□ -1.45
RRP40Q08285 RKI1YOR095C 777 nt5.99□□□□□ -1.45
RRP40Q08285 PXL1YKR090W 2121 nt5.99□□□□□ -1.45
RRP40Q08285 UTR2YEL040W 1404 nt5.99□□□□□ -1.45
RRP40Q08285 RIO1YOR119C 1455 nt5.98□□□□□ -1.45
RRP40Q08285 SDH4YDR178W 546 nt5.98□□□□□ -1.45
RRP40Q08285 YPR204WYPR204W 3099 nt5.98□□□□□ -1.45
RRP40Q08285 UBP13YBL067C 2244 nt5.97□□□□□ -1.45
RRP40Q08285 COX5AYNL052W 462 nt5.97□□□□□ -1.45
RRP40Q08285 MRPL10YNL284C 969 nt5.97□□□□□ -1.45
RRP40Q08285 FSF1YOR271C 984 nt5.97□□□□□ -1.45
RRP40Q08285 AMD2YDR242W 1650 nt5.96□□□□□ -1.46
RRP40Q08285 THI4YGR144W 981 nt5.96□□□□□ -1.46
RRP40Q08285 COQ3YOL096C 939 nt5.96□□□□□ -1.46
RRP40Q08285 RVB2YPL235W 1416 nt5.96□□□□□ -1.46
RRP40Q08285 YIL055CYIL055C 1884 nt5.96□□□□□ -1.46
RRP40Q08285 RAD59YDL059C 717 nt5.95□□□□□ -1.46
RRP40Q08285 HXT15YDL245C 1704 nt5.95□□□□□ -1.46
RRP40Q08285 YHL018WYHL018W 363 nt5.95□□□□□ -1.46
RRP40Q08285 LCB3YJL134W 1230 nt5.95□□□□□ -1.46
RRP40Q08285 HXT16YJR158W 1704 nt5.95□□□□□ -1.46
RRP40Q08285 AAT2YLR027C 1257 nt5.95□□□□□ -1.46
RRP40Q08285 SES1YDR023W 1389 nt5.94□□□□□ -1.46
RRP40Q08285 CYC8YBR112C 2901 nt5.94□□□□□ -1.46
RRP40Q08285 HVG1YER039C 750 nt5.94□□□□□ -1.46
RRP40Q08285 RNH201YNL072W 924 nt5.94□□□□□ -1.46
RRP40Q08285 BUG1YDL099W 1026 nt5.93□□□□□ -1.46
RRP40Q08285 PSR2YLR019W 1194 nt5.93□□□□□ -1.46
RRP40Q08285 AIM33YML087C 939 nt5.93□□□□□ -1.46
RRP40Q08285 YBL070CYBL070C 321 nt5.93□□□□□ -1.46
RRP40Q08285 ARG81YML099C 2643 nt5.93□□□□□ -1.46
RRP40Q08285 ERG1YGR175C 1491 nt5.92□□□□□ -1.46
RRP40Q08285 snR82snR82 268 nt5.92□□□□□ -1.46
RRP40Q08285 QCR8YJL166W 285 nt5.92□□□□□ -1.46
RRP40Q08285 RPS3YNL178W 723 nt5.92□□□□□ -1.46
RRP40Q08285 TSR3YOR006C 942 nt5.92□□□□□ -1.46
RRP40Q08285 DSF1YEL070W 1509 nt5.92□□□□□ -1.46
RRP40Q08285 YNR073CYNR073C 1509 nt5.92□□□□□ -1.46
RRP40Q08285 GEF1YJR040W 2340 nt5.92□□□□□ -1.46
RRP40Q08285 CRF1YDR223W 1404 nt5.91□□□□□ -1.46
RRP40Q08285 CCP1YKR066C 1086 nt5.91□□□□□ -1.46
RRP40Q08285 IES2YNL215W 963 nt5.91□□□□□ -1.46
RRP40Q08285 KTR1YOR099W 1182 nt5.91□□□□□ -1.46
RRP40Q08285 EFT2YDR385W 2529 nt5.91□□□□□ -1.46
RRP40Q08285 EFT1YOR133W 2529 nt5.91□□□□□ -1.46
RRP40Q08285 HIS7YBR248C 1659 nt5.91□□□□□ -1.46
RRP40Q08285 ACS1YAL054C 2142 nt5.9□□□□□ -1.46
RRP40Q08285 RIX7YLL034C 2514 nt5.9□□□□□ -1.46
RRP40Q08285 LAG2YOL025W 1983 nt5.9□□□□□ -1.46
RRP40Q08285 SPG1YGR236C 288 nt5.9□□□□□ -1.46
RRP40Q08285 YNL097W-AYNL097W-A 156 nt5.9□□□□□ -1.46
RRP40Q08285 YLL067CYLL067C 3618 nt5.89□□□□□ -1.47
RRP40Q08285 YDR387CYDR387C 1668 nt5.89□□□□□ -1.47
RRP40Q08285 ILV1YER086W 1731 nt5.88□□□□□ -1.47
RRP40Q08285 ECM14YHR132C 1293 nt5.88□□□□□ -1.47
RRP40Q08285 CIS3YJL158C 684 nt5.88□□□□□ -1.47
RRP40Q08285 POP5YAL033W 522 nt5.88□□□□□ -1.47
RRP40Q08285 YLR157W-EYLR157W-E 165 nt5.88□□□□□ -1.47
RRP40Q08285 YHR213W-AYHR213W-A 234 nt5.87□□□□□ -1.47
RRP40Q08285 PEX13YLR191W 1161 nt5.87□□□□□ -1.47
RRP40Q08285 MCH1YDL054C 1461 nt5.87□□□□□ -1.47
RRP40Q08285 POX1YGL205W 2247 nt5.87□□□□□ -1.47
RRP40Q08285 RGD1YBR260C 2001 nt5.86□□□□□ -1.47
RRP40Q08285 IMA5YJL216C 1746 nt5.86□□□□□ -1.47
RRP40Q08285 MAK31YCR020C-A 267 nt5.86□□□□□ -1.47
RRP40Q08285 YET3YDL072C 612 nt5.86□□□□□ -1.47
RRP40Q08285 DMA1YHR115C 1251 nt5.86□□□□□ -1.47
RRP40Q08285 MET8YBR213W 825 nt5.86□□□□□ -1.47
RRP40Q08285 HRQ1YDR291W 3234 nt5.86□□□□□ -1.47
RRP40Q08285 PGM1YKL127W 1713 nt5.85□□□□□ -1.47
RRP40Q08285 MPA43YNL249C 1629 nt5.85□□□□□ -1.47
RRP40Q08285 CSC1YLR241W 2349 nt5.85□□□□□ -1.47
RRP40Q08285 CRP1YHR146W 1398 nt5.85□□□□□ -1.47
RRP40Q08285 EXG1YLR300W 1347 nt5.85□□□□□ -1.47
RRP40Q08285 YDR015CYDR015C 240 nt5.85□□□□□ -1.47
RRP40Q08285 TMT1YER175C 900 nt5.85□□□□□ -1.47
RRP40Q08285 YNL285WYNL285W 372 nt5.85□□□□□ -1.47
RRP40Q08285 YMC1YPR058W 924 nt5.85□□□□□ -1.47
RRP40Q08285 YKR023WYKR023W 1593 nt5.84□□□□□ -1.47
RRP40Q08285 SKI2YLR398C 3864 nt5.84□□□□□ -1.47
RRP40Q08285 YDL218WYDL218W 954 nt5.84□□□□□ -1.47
RRP40Q08285 YML133CYML133C 4125 nt5.83□□□□□ -1.48
RRP40Q08285 PPM1YDR435C 987 nt5.83□□□□□ -1.48
RRP40Q08285 YIL077CYIL077C 963 nt5.83□□□□□ -1.48
RRP40Q08285 ICS3YJL077C 396 nt5.83□□□□□ -1.48
RRP40Q08285 QRI5YLR204W 336 nt5.83□□□□□ -1.48
RRP40Q08285 RPL21AYBR191W 483 nt5.83□□□□□ -1.48
RRP40Q08285 PYC2YBR218C 3543 nt5.82□□□□□ -1.48
RRP40Q08285 TPO3YPR156C 1869 nt5.82□□□□□ -1.48
RRP40Q08285 TIM22YDL217C 624 nt5.82□□□□□ -1.48
RRP40Q08285 PRE3YJL001W 648 nt5.82□□□□□ -1.48
RRP40Q08285 YCK1YHR135C 1617 nt5.81□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 35.3 ms