Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 RPL3YOR063W 1164 nt6.44□□□□□ -1.38
VPS13Q07878 GWT1YJL091C 1473 nt6.44□□□□□ -1.38
VPS13Q07878 MTC1YJL123C 1437 nt6.44□□□□□ -1.38
VPS13Q07878 ILV1YER086W 1731 nt6.44□□□□□ -1.38
VPS13Q07878 YDL085C-AYDL085C-A 207 nt6.44□□□□□ -1.38
VPS13Q07878 UTR4YEL038W 684 nt6.44□□□□□ -1.38
VPS13Q07878 PRM10YJL108C 1152 nt6.44□□□□□ -1.38
VPS13Q07878 ICT1YLR099C 1185 nt6.43□□□□□ -1.38
VPS13Q07878 ERS1YCR075C 783 nt6.43□□□□□ -1.38
VPS13Q07878 MSG5YNL053W 1470 nt6.42□□□□□ -1.38
VPS13Q07878 YPL277CYPL277C 1464 nt6.42□□□□□ -1.38
VPS13Q07878 TUF1YOR187W 1314 nt6.42□□□□□ -1.38
VPS13Q07878 YDL129WYDL129W 876 nt6.42□□□□□ -1.38
VPS13Q07878 YBR016WYBR016W 387 nt6.41□□□□□ -1.38
VPS13Q07878 TPO3YPR156C 1869 nt6.41□□□□□ -1.38
VPS13Q07878 PPM2YOL141W 2088 nt6.41□□□□□ -1.38
VPS13Q07878 DIA4YHR011W 1341 nt6.4□□□□□ -1.38
VPS13Q07878 GNA1YFL017C 480 nt6.4□□□□□ -1.38
VPS13Q07878 AFG1YEL052W 1530 nt6.4□□□□□ -1.39
VPS13Q07878 snR4snR4 186 nt6.4□□□□□ -1.39
VPS13Q07878 YHR131CYHR131C 2553 nt6.39□□□□□ -1.39
VPS13Q07878 LEU5YHR002W 1074 nt6.39□□□□□ -1.39
VPS13Q07878 OAZ1YPL052W 879 nt6.39□□□□□ -1.39
VPS13Q07878 GCN3YKR026C 918 nt6.39□□□□□ -1.39
VPS13Q07878 MRPL36YBR122C 534 nt6.39□□□□□ -1.39
VPS13Q07878 LDS1YAL018C 978 nt6.38□□□□□ -1.39
VPS13Q07878 YKL151CYKL151C 1014 nt6.38□□□□□ -1.39
VPS13Q07878 YOR318CYOR318C 306 nt6.38□□□□□ -1.39
VPS13Q07878 PHB1YGR132C 864 nt6.38□□□□□ -1.39
VPS13Q07878 IRC11YOR013W 471 nt6.38□□□□□ -1.39
VPS13Q07878 GGC1YDL198C 903 nt6.37□□□□□ -1.39
VPS13Q07878 YDR034W-BYDR034W-B 156 nt6.37□□□□□ -1.39
VPS13Q07878 YKR041WYKR041W 753 nt6.37□□□□□ -1.39
VPS13Q07878 YDL114WYDL114W 927 nt6.37□□□□□ -1.39
VPS13Q07878 PGU1YJR153W 1086 nt6.37□□□□□ -1.39
VPS13Q07878 ARR3YPR201W 1215 nt6.37□□□□□ -1.39
VPS13Q07878 AGP2YBR132C 1791 nt6.37□□□□□ -1.39
VPS13Q07878 YJR146WYJR146W 354 nt6.36□□□□□ -1.39
VPS13Q07878 TDA6YPR157W 1404 nt6.36□□□□□ -1.39
VPS13Q07878 YHR214WYHR214W 612 nt6.36□□□□□ -1.39
VPS13Q07878 YAR066WYAR066W 612 nt6.36□□□□□ -1.39
VPS13Q07878 UBC11YOR339C 471 nt6.36□□□□□ -1.39
VPS13Q07878 YLR312CYLR312C 1197 nt6.36□□□□□ -1.39
VPS13Q07878 HAP3YBL021C 435 nt6.36□□□□□ -1.39
VPS13Q07878 RPT6YGL048C 1218 nt6.35□□□□□ -1.39
VPS13Q07878 OPI11YPR044C 354 nt6.35□□□□□ -1.39
VPS13Q07878 PAD1YDR538W 729 nt6.35□□□□□ -1.39
VPS13Q07878 NOB1YOR056C 1380 nt6.35□□□□□ -1.39
VPS13Q07878 YKE4YIL023C 1041 nt6.34□□□□□ -1.39
VPS13Q07878 MRPL4YLR439W 960 nt6.34□□□□□ -1.39
VPS13Q07878 PXR1YGR280C 816 nt6.34□□□□□ -1.39
VPS13Q07878 RPS9AYPL081W 594 nt6.34□□□□□ -1.39
VPS13Q07878 PAC2YER007W 1557 nt6.34□□□□□ -1.39
VPS13Q07878 EMP46YLR080W 1335 nt6.34□□□□□ -1.4
VPS13Q07878 YPL250W-AYPL250W-A 288 nt6.33□□□□□ -1.4
VPS13Q07878 MIM2YLR099W-A 264 nt6.33□□□□□ -1.4
VPS13Q07878 OST3YOR085W 1053 nt6.33□□□□□ -1.4
VPS13Q07878 MRPL28YDR462W 444 nt6.32□□□□□ -1.4
VPS13Q07878 SHM1YBR263W 1473 nt6.32□□□□□ -1.4
VPS13Q07878 SER1YOR184W 1188 nt6.31□□□□□ -1.4
VPS13Q07878 YMR111CYMR111C 1389 nt6.31□□□□□ -1.4
VPS13Q07878 TIM54YJL054W 1437 nt6.31□□□□□ -1.4
VPS13Q07878 YGL194C-AYGL194C-A 243 nt6.31□□□□□ -1.4
VPS13Q07878 tR(ACG)DtR(ACG)D 73 nt6.31□□□□□ -1.4
VPS13Q07878 tR(ACG)EtR(ACG)E 73 nt6.31□□□□□ -1.4
VPS13Q07878 tR(ACG)KtR(ACG)K 73 nt6.31□□□□□ -1.4
VPS13Q07878 tR(ACG)LtR(ACG)L 73 nt6.31□□□□□ -1.4
VPS13Q07878 tR(ACG)OtR(ACG)O 73 nt6.31□□□□□ -1.4
VPS13Q07878 DPH5YLR172C 903 nt6.31□□□□□ -1.4
VPS13Q07878 JAC1YGL018C 555 nt6.3□□□□□ -1.4
VPS13Q07878 DFR1YOR236W 636 nt6.3□□□□□ -1.4
VPS13Q07878 YCK1YHR135C 1617 nt6.3□□□□□ -1.4
VPS13Q07878 CDC34YDR054C 888 nt6.3□□□□□ -1.4
VPS13Q07878 MSY1YPL097W 1479 nt6.3□□□□□ -1.4
VPS13Q07878 HEM1YDR232W 1647 nt6.3□□□□□ -1.4
VPS13Q07878 MHR1YDR296W 681 nt6.3□□□□□ -1.4
VPS13Q07878 SLO1YER180C-A 258 nt6.3□□□□□ -1.4
VPS13Q07878 YPR204WYPR204W 3099 nt6.29□□□□□ -1.4
VPS13Q07878 TOK1YJL093C 2076 nt6.29□□□□□ -1.4
VPS13Q07878 MCH1YDL054C 1461 nt6.29□□□□□ -1.4
VPS13Q07878 UTP4YDR324C 2331 nt6.29□□□□□ -1.4
VPS13Q07878 TSA1YML028W 591 nt6.29□□□□□ -1.4
VPS13Q07878 RRP4YHR069C 1080 nt6.29□□□□□ -1.4
VPS13Q07878 YDR053WYDR053W 396 nt6.28□□□□□ -1.4
VPS13Q07878 BBP1YPL255W 1158 nt6.28□□□□□ -1.4
VPS13Q07878 EXG1YLR300W 1347 nt6.28□□□□□ -1.4
VPS13Q07878 PKC1YBL105C 3456 nt6.28□□□□□ -1.4
VPS13Q07878 SLC1YDL052C 912 nt6.28□□□□□ -1.4
VPS13Q07878 YDR154CYDR154C 351 nt6.28□□□□□ -1.4
VPS13Q07878 DYS1YHR068W 1164 nt6.28□□□□□ -1.4
VPS13Q07878 DAL82YNL314W 768 nt6.28□□□□□ -1.4
VPS13Q07878 WTM1YOR230W 1314 nt6.28□□□□□ -1.4
VPS13Q07878 ORC5YNL261W 1440 nt6.28□□□□□ -1.4
VPS13Q07878 HRQ1YDR291W 3234 nt6.27□□□□□ -1.41
VPS13Q07878 MIM1YOL026C 342 nt6.27□□□□□ -1.41
VPS13Q07878 YEL068CYEL068C 333 nt6.26□□□□□ -1.41
VPS13Q07878 MAL31YBR298C 1845 nt6.26□□□□□ -1.41
VPS13Q07878 FBA1YKL060C 1080 nt6.25□□□□□ -1.41
VPS13Q07878 YAP1801YHR161C 1914 nt6.25□□□□□ -1.41
VPS13Q07878 WHI2YOR043W 1461 nt6.25□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 58.6 ms