Protein–RNA interactions for Protein: Q04214

TY1B-MR1, Transposon Ty1-MR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-MR1Q04214 BRL1YHR036W 1416 nt9.2□□□□□ -0.94
TY1B-MR1Q04214 MIP1YOR330C 3765 nt9.19□□□□□ -0.94
TY1B-MR1Q04214 VMA16YHR026W 642 nt9.19□□□□□ -0.94
TY1B-MR1Q04214 LCB3YJL134W 1230 nt9.19□□□□□ -0.94
TY1B-MR1Q04214 POP5YAL033W 522 nt9.19□□□□□ -0.94
TY1B-MR1Q04214 TOS6YNL300W 309 nt9.19□□□□□ -0.94
TY1B-MR1Q04214 PRI2YKL045W 1587 nt9.19□□□□□ -0.94
TY1B-MR1Q04214 MDH3YDL078C 1032 nt9.19□□□□□ -0.94
TY1B-MR1Q04214 RRP45YDR280W 918 nt9.19□□□□□ -0.94
TY1B-MR1Q04214 UBC11YOR339C 471 nt9.19□□□□□ -0.94
TY1B-MR1Q04214 TMT1YER175C 900 nt9.18□□□□□ -0.94
TY1B-MR1Q04214 tR(ACG)JtR(ACG)J 73 nt9.18□□□□□ -0.94
TY1B-MR1Q04214 MRPL13YKR006C 795 nt9.18□□□□□ -0.94
TY1B-MR1Q04214 IES2YNL215W 963 nt9.18□□□□□ -0.94
TY1B-MR1Q04214 ADE13YLR359W 1449 nt9.18□□□□□ -0.94
TY1B-MR1Q04214 VID30YGL227W 2877 nt9.17□□□□□ -0.94
TY1B-MR1Q04214 YDR415CYDR415C 1125 nt9.17□□□□□ -0.94
TY1B-MR1Q04214 ERG3YLR056W 1098 nt9.17□□□□□ -0.94
TY1B-MR1Q04214 YLR123CYLR123C 330 nt9.17□□□□□ -0.94
TY1B-MR1Q04214 YPR114WYPR114W 948 nt9.17□□□□□ -0.94
TY1B-MR1Q04214 KNH1YDL049C 807 nt9.16□□□□□ -0.94
TY1B-MR1Q04214 UTR2YEL040W 1404 nt9.16□□□□□ -0.94
TY1B-MR1Q04214 YER137CYER137C 447 nt9.16□□□□□ -0.94
TY1B-MR1Q04214 ARR3YPR201W 1215 nt9.16□□□□□ -0.94
TY1B-MR1Q04214 PMA2YPL036W 2844 nt9.16□□□□□ -0.94
TY1B-MR1Q04214 TKL2YBR117C 2046 nt9.15□□□□□ -0.94
TY1B-MR1Q04214 YLL066CYLL066C 3618 nt9.15□□□□□ -0.94
TY1B-MR1Q04214 YLL067CYLL067C 3618 nt9.15□□□□□ -0.94
TY1B-MR1Q04214 CBP4YGR174C 513 nt9.15□□□□□ -0.94
TY1B-MR1Q04214 HAP3YBL021C 435 nt9.15□□□□□ -0.94
TY1B-MR1Q04214 CDC34YDR054C 888 nt9.14□□□□□ -0.95
TY1B-MR1Q04214 TSA1YML028W 591 nt9.14□□□□□ -0.95
TY1B-MR1Q04214 MDL2YPL270W 2322 nt9.14□□□□□ -0.95
TY1B-MR1Q04214 PRC1YMR297W 1599 nt9.14□□□□□ -0.95
TY1B-MR1Q04214 MCH1YDL054C 1461 nt9.14□□□□□ -0.95
TY1B-MR1Q04214 ARP2YDL029W 1176 nt9.14□□□□□ -0.95
TY1B-MR1Q04214 YDL114WYDL114W 927 nt9.14□□□□□ -0.95
TY1B-MR1Q04214 YNL019CYNL019C 855 nt9.14□□□□□ -0.95
TY1B-MR1Q04214 YNL033WYNL033W 855 nt9.14□□□□□ -0.95
TY1B-MR1Q04214 RAD24YER173W 1980 nt9.14□□□□□ -0.95
TY1B-MR1Q04214 YEL068CYEL068C 333 nt9.13□□□□□ -0.95
TY1B-MR1Q04214 RRP4YHR069C 1080 nt9.13□□□□□ -0.95
TY1B-MR1Q04214 GCN3YKR026C 918 nt9.13□□□□□ -0.95
TY1B-MR1Q04214 MRPL36YBR122C 534 nt9.13□□□□□ -0.95
TY1B-MR1Q04214 NPP1YCR026C 2229 nt9.13□□□□□ -0.95
TY1B-MR1Q04214 RGT2YDL138W 2292 nt9.12□□□□□ -0.95
TY1B-MR1Q04214 YIR042CYIR042C 711 nt9.12□□□□□ -0.95
TY1B-MR1Q04214 YJR107WYJR107W 987 nt9.12□□□□□ -0.95
TY1B-MR1Q04214 CHA1YCL064C 1083 nt9.11□□□□□ -0.95
TY1B-MR1Q04214 YKL031WYKL031W 414 nt9.11□□□□□ -0.95
TY1B-MR1Q04214 YJR015WYJR015W 1533 nt9.1□□□□□ -0.95
TY1B-MR1Q04214 YMR155WYMR155W 1644 nt9.1□□□□□ -0.95
TY1B-MR1Q04214 PSY4YBL046W 1326 nt9.1□□□□□ -0.95
TY1B-MR1Q04214 MCM3YEL032W 2916 nt9.1□□□□□ -0.95
TY1B-MR1Q04214 PEX13YLR191W 1161 nt9.09□□□□□ -0.95
TY1B-MR1Q04214 ERI1YPL096C-A 207 nt9.09□□□□□ -0.95
TY1B-MR1Q04214 HSP26YBR072W 645 nt9.09□□□□□ -0.95
TY1B-MR1Q04214 CNE1YAL058W 1509 nt9.09□□□□□ -0.95
TY1B-MR1Q04214 YFR034W-AYFR034W-A 288 nt9.08□□□□□ -0.96
TY1B-MR1Q04214 ARC35YNR035C 1029 nt9.07□□□□□ -0.96
TY1B-MR1Q04214 CCP1YKR066C 1086 nt9.07□□□□□ -0.96
TY1B-MR1Q04214 UFD1YGR048W 1086 nt9.06□□□□□ -0.96
TY1B-MR1Q04214 YAL056C-AYAL056C-A 351 nt9.05□□□□□ -0.96
TY1B-MR1Q04214 MRPS16YPL013C 366 nt9.05□□□□□ -0.96
TY1B-MR1Q04214 RFC1YOR217W 2586 nt9.04□□□□□ -0.96
TY1B-MR1Q04214 YNR014WYNR014W 639 nt9.04□□□□□ -0.96
TY1B-MR1Q04214 YBR230W-AYBR230W-A 201 nt9.04□□□□□ -0.96
TY1B-MR1Q04214 NUD1YOR373W 2556 nt9.03□□□□□ -0.96
TY1B-MR1Q04214 SEC20YDR498C 1152 nt9.03□□□□□ -0.96
TY1B-MR1Q04214 CAR1YPL111W 1002 nt9.03□□□□□ -0.96
TY1B-MR1Q04214 SFC1YJR095W 969 nt9.02□□□□□ -0.97
TY1B-MR1Q04214 RPL21AYBR191W 483 nt9.02□□□□□ -0.97
TY1B-MR1Q04214 tR(ACG)DtR(ACG)D 73 nt9.01□□□□□ -0.97
TY1B-MR1Q04214 tR(ACG)EtR(ACG)E 73 nt9.01□□□□□ -0.97
TY1B-MR1Q04214 tR(ACG)KtR(ACG)K 73 nt9.01□□□□□ -0.97
TY1B-MR1Q04214 tR(ACG)LtR(ACG)L 73 nt9.01□□□□□ -0.97
TY1B-MR1Q04214 tR(ACG)OtR(ACG)O 73 nt9.01□□□□□ -0.97
TY1B-MR1Q04214 TRR1YDR353W 960 nt9.01□□□□□ -0.97
TY1B-MR1Q04214 SLA2YNL243W 2907 nt9.01□□□□□ -0.97
TY1B-MR1Q04214 ATG4YNL223W 1485 nt9□□□□□ -0.97
TY1B-MR1Q04214 tX(XXX)DtX(XXX)D 100 nt9□□□□□ -0.97
TY1B-MR1Q04214 LDS1YAL018C 978 nt9□□□□□ -0.97
TY1B-MR1Q04214 YKR032WYKR032W 315 nt9□□□□□ -0.97
TY1B-MR1Q04214 MCH2YKL221W 1422 nt9□□□□□ -0.97
TY1B-MR1Q04214 COX16YJL003W 357 nt8.99□□□□□ -0.97
TY1B-MR1Q04214 AIM34YMR003W 597 nt8.99□□□□□ -0.97
TY1B-MR1Q04214 YMR119W-AYMR119W-A 375 nt8.99□□□□□ -0.97
TY1B-MR1Q04214 BSC4YNL269W 396 nt8.99□□□□□ -0.97
TY1B-MR1Q04214 RPS9AYPL081W 594 nt8.99□□□□□ -0.97
TY1B-MR1Q04214 HSM3YBR272C 1443 nt8.99□□□□□ -0.97
TY1B-MR1Q04214 WHI2YOR043W 1461 nt8.99□□□□□ -0.97
TY1B-MR1Q04214 HDA1YNL021W 2121 nt8.99□□□□□ -0.97
TY1B-MR1Q04214 APE3YBR286W 1614 nt8.99□□□□□ -0.97
TY1B-MR1Q04214 GAA1YLR088W 1845 nt8.99□□□□□ -0.97
TY1B-MR1Q04214 MET2YNL277W 1461 nt8.98□□□□□ -0.97
TY1B-MR1Q04214 KTR1YOR099W 1182 nt8.98□□□□□ -0.97
TY1B-MR1Q04214 TAH11YJR046W 1815 nt8.97□□□□□ -0.97
TY1B-MR1Q04214 YFL064CYFL064C 525 nt8.97□□□□□ -0.97
TY1B-MR1Q04214 YGL235WYGL235W 537 nt8.97□□□□□ -0.97
TY1B-MR1Q04214 ICT1YLR099C 1185 nt8.97□□□□□ -0.97
Retrieved 100 of 7,029 protein–RNA pairs in 69.4 ms